Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CAPNS1P04632 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CAPNS1P04632 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.33■□□□□ 0.85
CAPNS1P04632 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CAPNS1P04632 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CAPNS1P04632 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.33■□□□□ 0.85
CAPNS1P04632 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.33■□□□□ 0.85
CAPNS1P04632 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.33■□□□□ 0.85
CAPNS1P04632 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CAPNS1P04632 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.33■□□□□ 0.84
CAPNS1P04632 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CAPNS1P04632 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CAPNS1P04632 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CAPNS1P04632 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.33■□□□□ 0.84
CAPNS1P04632 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.33■□□□□ 0.84
CAPNS1P04632 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CAPNS1P04632 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPNS1P04632 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPNS1P04632 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPNS1P04632 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPNS1P04632 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPNS1P04632 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.32■□□□□ 0.84
CAPNS1P04632 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CAPNS1P04632 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.32■□□□□ 0.84
CAPNS1P04632 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.32■□□□□ 0.84
CAPNS1P04632 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.32■□□□□ 0.84
CAPNS1P04632 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.32■□□□□ 0.84
CAPNS1P04632 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CAPNS1P04632 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CAPNS1P04632 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPNS1P04632 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CAPNS1P04632 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPNS1P04632 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPNS1P04632 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPNS1P04632 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CAPNS1P04632 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.32■□□□□ 0.84
CAPNS1P04632 FEM1AP1-201ENST00000431297 1995 ntBASIC20.32■□□□□ 0.84
CAPNS1P04632 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CAPNS1P04632 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
CAPNS1P04632 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CAPNS1P04632 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.31■□□□□ 0.84
CAPNS1P04632 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.31■□□□□ 0.84
CAPNS1P04632 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.31■□□□□ 0.84
CAPNS1P04632 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPNS1P04632 LINC01960-201ENST00000563759 1884 ntBASIC20.31■□□□□ 0.84
CAPNS1P04632 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CAPNS1P04632 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.31■□□□□ 0.84
CAPNS1P04632 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.31■□□□□ 0.84
CAPNS1P04632 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPNS1P04632 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPNS1P04632 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPNS1P04632 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPNS1P04632 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPNS1P04632 AP003097.1-201ENST00000530657 1135 ntBASIC20.31■□□□□ 0.84
CAPNS1P04632 LINC01023-201ENST00000606054 436 ntBASIC20.31■□□□□ 0.84
CAPNS1P04632 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CAPNS1P04632 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CAPNS1P04632 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPNS1P04632 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.31■□□□□ 0.84
CAPNS1P04632 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
CAPNS1P04632 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPNS1P04632 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.3■□□□□ 0.84
CAPNS1P04632 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CAPNS1P04632 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.3■□□□□ 0.84
CAPNS1P04632 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPNS1P04632 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPNS1P04632 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CAPNS1P04632 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPNS1P04632 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPNS1P04632 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPNS1P04632 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CAPNS1P04632 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.3■□□□□ 0.84
CAPNS1P04632 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CAPNS1P04632 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.3■□□□□ 0.84
CAPNS1P04632 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.3■□□□□ 0.84
CAPNS1P04632 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.3■□□□□ 0.84
CAPNS1P04632 AC069236.1-201ENST00000604339 616 ntBASIC20.3■□□□□ 0.84
CAPNS1P04632 RNF165-205ENST00000588679 2904 ntBASIC20.3■□□□□ 0.84
CAPNS1P04632 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.3■□□□□ 0.84
CAPNS1P04632 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPNS1P04632 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPNS1P04632 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CAPNS1P04632 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPNS1P04632 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPNS1P04632 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.29■□□□□ 0.84
CAPNS1P04632 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CAPNS1P04632 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CAPNS1P04632 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CAPNS1P04632 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPNS1P04632 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CAPNS1P04632 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CAPNS1P04632 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CAPNS1P04632 MIR718-201ENST00000390190 70 ntBASIC20.29■□□□□ 0.84
CAPNS1P04632 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CAPNS1P04632 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CAPNS1P04632 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.29■□□□□ 0.84
CAPNS1P04632 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.29■□□□□ 0.84
CAPNS1P04632 Z99916.2-201ENST00000604037 246 ntBASIC20.29■□□□□ 0.84
CAPNS1P04632 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.29■□□□□ 0.84
CAPNS1P04632 AC008694.1-202ENST00000636953 945 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms