Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.87■□□□□ 0.45
LCATP04180 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LCATP04180 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LCATP04180 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LCATP04180 KRT18P5-201ENST00000436075 1291 ntBASIC17.87■□□□□ 0.45
LCATP04180 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
LCATP04180 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.87■□□□□ 0.45
LCATP04180 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.87■□□□□ 0.45
LCATP04180 AC137761.2-201ENST00000561729 223 ntBASIC17.87■□□□□ 0.45
LCATP04180 AC145350.3-201ENST00000569033 163 ntBASIC17.87■□□□□ 0.45
LCATP04180 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.87■□□□□ 0.45
LCATP04180 AC243732.1-201ENST00000612648 864 ntBASIC17.87■□□□□ 0.45
LCATP04180 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
LCATP04180 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.87■□□□□ 0.45
LCATP04180 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LCATP04180 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LCATP04180 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LCATP04180 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.87■□□□□ 0.45
LCATP04180 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LCATP04180 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LCATP04180 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LCATP04180 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LCATP04180 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LCATP04180 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.86■□□□□ 0.45
LCATP04180 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LCATP04180 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
LCATP04180 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.86■□□□□ 0.45
LCATP04180 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.86■□□□□ 0.45
LCATP04180 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LCATP04180 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.86■□□□□ 0.45
LCATP04180 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LCATP04180 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LCATP04180 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LCATP04180 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LCATP04180 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LCATP04180 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.86■□□□□ 0.45
LCATP04180 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.86■□□□□ 0.45
LCATP04180 LINC01006-201ENST00000333319 2292 ntBASIC17.86■□□□□ 0.45
LCATP04180 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LCATP04180 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LCATP04180 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LCATP04180 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LCATP04180 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LCATP04180 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.85■□□□□ 0.45
LCATP04180 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.85■□□□□ 0.45
LCATP04180 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.85■□□□□ 0.45
LCATP04180 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LCATP04180 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LCATP04180 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LCATP04180 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.85■□□□□ 0.45
LCATP04180 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.85■□□□□ 0.45
LCATP04180 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
LCATP04180 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LCATP04180 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LCATP04180 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LCATP04180 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCATP04180 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCATP04180 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LCATP04180 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LCATP04180 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LCATP04180 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCATP04180 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCATP04180 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCATP04180 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.84■□□□□ 0.45
LCATP04180 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCATP04180 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.84■□□□□ 0.45
LCATP04180 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCATP04180 AC016769.1-201ENST00000409132 1010 ntBASIC17.84■□□□□ 0.45
LCATP04180 AC091799.1-201ENST00000422823 811 ntBASIC17.84■□□□□ 0.45
LCATP04180 KRT18P11-201ENST00000435214 1283 ntBASIC17.84■□□□□ 0.45
LCATP04180 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.84■□□□□ 0.45
LCATP04180 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.84■□□□□ 0.45
LCATP04180 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LCATP04180 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.84■□□□□ 0.45
LCATP04180 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LCATP04180 MIR5787-201ENST00000611784 55 ntBASIC17.84■□□□□ 0.45
LCATP04180 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.84■□□□□ 0.45
LCATP04180 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LCATP04180 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LCATP04180 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LCATP04180 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCATP04180 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LCATP04180 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.83■□□□□ 0.45
LCATP04180 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
LCATP04180 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LCATP04180 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.83■□□□□ 0.45
LCATP04180 LINC01521-201ENST00000504184 1943 ntBASIC17.83■□□□□ 0.44
LCATP04180 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LCATP04180 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.83■□□□□ 0.44
LCATP04180 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
LCATP04180 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.83■□□□□ 0.44
LCATP04180 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LCATP04180 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LCATP04180 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LCATP04180 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LCATP04180 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.83■□□□□ 0.44
LCATP04180 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.83■□□□□ 0.44
LCATP04180 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LCATP04180 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LCATP04180 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms