Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
BEST1O76090 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BEST1O76090 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
BEST1O76090 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BEST1O76090 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BEST1O76090 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
BEST1O76090 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BEST1O76090 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
BEST1O76090 AL121603.2-201ENST00000557373 2117 ntBASIC21.55■■□□□ 1.04
BEST1O76090 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BEST1O76090 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.55■■□□□ 1.04
BEST1O76090 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.55■■□□□ 1.04
BEST1O76090 AC097658.1-201ENST00000475555 843 ntBASIC21.55■■□□□ 1.04
BEST1O76090 AL356652.1-201ENST00000615962 565 ntBASIC21.55■■□□□ 1.04
BEST1O76090 MIR2861-201ENST00000636310 90 ntBASIC21.55■■□□□ 1.04
BEST1O76090 AC006128.1-201ENST00000624704 1661 ntBASIC21.55■■□□□ 1.04
BEST1O76090 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BEST1O76090 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
BEST1O76090 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BEST1O76090 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BEST1O76090 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BEST1O76090 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.55■■□□□ 1.04
BEST1O76090 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BEST1O76090 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
BEST1O76090 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
BEST1O76090 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.54■■□□□ 1.04
BEST1O76090 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.54■■□□□ 1.04
BEST1O76090 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
BEST1O76090 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
BEST1O76090 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.54■■□□□ 1.04
BEST1O76090 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.54■■□□□ 1.04
BEST1O76090 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
BEST1O76090 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
BEST1O76090 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
BEST1O76090 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
BEST1O76090 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.54■■□□□ 1.04
BEST1O76090 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BEST1O76090 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
BEST1O76090 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
BEST1O76090 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BEST1O76090 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
BEST1O76090 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.53■■□□□ 1.04
BEST1O76090 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.53■■□□□ 1.04
BEST1O76090 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.53■■□□□ 1.04
BEST1O76090 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.53■■□□□ 1.04
BEST1O76090 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
BEST1O76090 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BEST1O76090 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BEST1O76090 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
BEST1O76090 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
BEST1O76090 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.53■■□□□ 1.04
BEST1O76090 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
BEST1O76090 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BEST1O76090 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BEST1O76090 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BEST1O76090 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BEST1O76090 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
BEST1O76090 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BEST1O76090 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BEST1O76090 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
BEST1O76090 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.52■■□□□ 1.04
BEST1O76090 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BEST1O76090 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.52■■□□□ 1.04
BEST1O76090 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BEST1O76090 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
BEST1O76090 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
BEST1O76090 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.52■■□□□ 1.04
BEST1O76090 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.52■■□□□ 1.04
BEST1O76090 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
BEST1O76090 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.52■■□□□ 1.04
BEST1O76090 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BEST1O76090 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
BEST1O76090 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
BEST1O76090 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.52■■□□□ 1.03
BEST1O76090 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
BEST1O76090 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.52■■□□□ 1.03
BEST1O76090 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
BEST1O76090 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
BEST1O76090 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.51■■□□□ 1.03
BEST1O76090 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.51■■□□□ 1.03
BEST1O76090 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
BEST1O76090 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
BEST1O76090 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BEST1O76090 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
BEST1O76090 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.51■■□□□ 1.03
BEST1O76090 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
BEST1O76090 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.51■■□□□ 1.03
BEST1O76090 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.51■■□□□ 1.03
BEST1O76090 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BEST1O76090 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.51■■□□□ 1.03
BEST1O76090 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
BEST1O76090 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.51■■□□□ 1.03
BEST1O76090 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BEST1O76090 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BEST1O76090 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
BEST1O76090 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
BEST1O76090 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
BEST1O76090 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BEST1O76090 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BEST1O76090 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms