Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLPXO76031 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLPXO76031 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.53■□□□□ 0.56
CLPXO76031 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLPXO76031 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLPXO76031 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.53■□□□□ 0.56
CLPXO76031 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLPXO76031 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLPXO76031 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLPXO76031 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.52■□□□□ 0.56
CLPXO76031 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.52■□□□□ 0.56
CLPXO76031 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
CLPXO76031 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.52■□□□□ 0.56
CLPXO76031 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CLPXO76031 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CLPXO76031 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.52■□□□□ 0.56
CLPXO76031 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.52■□□□□ 0.56
CLPXO76031 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLPXO76031 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.52■□□□□ 0.56
CLPXO76031 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLPXO76031 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.52■□□□□ 0.56
CLPXO76031 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.52■□□□□ 0.56
CLPXO76031 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.52■□□□□ 0.56
CLPXO76031 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLPXO76031 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLPXO76031 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.52■□□□□ 0.55
CLPXO76031 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLPXO76031 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.55
CLPXO76031 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.51■□□□□ 0.55
CLPXO76031 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLPXO76031 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.51■□□□□ 0.55
CLPXO76031 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLPXO76031 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLPXO76031 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLPXO76031 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLPXO76031 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CLPXO76031 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.51■□□□□ 0.55
CLPXO76031 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLPXO76031 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.51■□□□□ 0.55
CLPXO76031 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.51■□□□□ 0.55
CLPXO76031 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CLPXO76031 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.51■□□□□ 0.55
CLPXO76031 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLPXO76031 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
CLPXO76031 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CLPXO76031 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLPXO76031 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLPXO76031 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLPXO76031 AC125437.2-201ENST00000625180 2167 ntBASIC18.51■□□□□ 0.55
CLPXO76031 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.51■□□□□ 0.55
CLPXO76031 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPXO76031 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPXO76031 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.5■□□□□ 0.55
CLPXO76031 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPXO76031 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPXO76031 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPXO76031 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLPXO76031 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLPXO76031 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.5■□□□□ 0.55
CLPXO76031 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CLPXO76031 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPXO76031 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.5■□□□□ 0.55
CLPXO76031 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPXO76031 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
CLPXO76031 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.5■□□□□ 0.55
CLPXO76031 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLPXO76031 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.5■□□□□ 0.55
CLPXO76031 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CLPXO76031 AC093503.3-201ENST00000624917 2352 ntBASIC18.5■□□□□ 0.55
CLPXO76031 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.5■□□□□ 0.55
CLPXO76031 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.5■□□□□ 0.55
CLPXO76031 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPXO76031 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPXO76031 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPXO76031 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.5■□□□□ 0.55
CLPXO76031 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPXO76031 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLPXO76031 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLPXO76031 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.5■□□□□ 0.55
CLPXO76031 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.49■□□□□ 0.55
CLPXO76031 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLPXO76031 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.49■□□□□ 0.55
CLPXO76031 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
CLPXO76031 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLPXO76031 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLPXO76031 AC138932.1-201ENST00000534164 6830 ntBASIC18.49■□□□□ 0.55
CLPXO76031 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.49■□□□□ 0.55
CLPXO76031 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.49■□□□□ 0.55
CLPXO76031 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.49■□□□□ 0.55
CLPXO76031 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLPXO76031 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CLPXO76031 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.49■□□□□ 0.55
CLPXO76031 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLPXO76031 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLPXO76031 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLPXO76031 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLPXO76031 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLPXO76031 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CLPXO76031 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLPXO76031 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms