Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTNSO60931 AC087633.2-202ENST00000565166 1439 ntBASIC19.21■□□□□ 0.67
CTNSO60931 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.21■□□□□ 0.67
CTNSO60931 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.21■□□□□ 0.67
CTNSO60931 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.21■□□□□ 0.67
CTNSO60931 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.21■□□□□ 0.67
CTNSO60931 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.21■□□□□ 0.67
CTNSO60931 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.21■□□□□ 0.67
CTNSO60931 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTNSO60931 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.21■□□□□ 0.67
CTNSO60931 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTNSO60931 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CTNSO60931 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTNSO60931 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.21■□□□□ 0.67
CTNSO60931 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.66
CTNSO60931 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CTNSO60931 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CTNSO60931 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTNSO60931 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.2■□□□□ 0.66
CTNSO60931 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.2■□□□□ 0.66
CTNSO60931 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTNSO60931 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTNSO60931 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CTNSO60931 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTNSO60931 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTNSO60931 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTNSO60931 GUSBP6-202ENST00000438529 1198 ntBASIC19.2■□□□□ 0.66
CTNSO60931 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.2■□□□□ 0.66
CTNSO60931 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.2■□□□□ 0.66
CTNSO60931 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.2■□□□□ 0.66
CTNSO60931 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.2■□□□□ 0.66
CTNSO60931 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTNSO60931 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CTNSO60931 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.2■□□□□ 0.66
CTNSO60931 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTNSO60931 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTNSO60931 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.2■□□□□ 0.66
CTNSO60931 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTNSO60931 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.2■□□□□ 0.66
CTNSO60931 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTNSO60931 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTNSO60931 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.19■□□□□ 0.66
CTNSO60931 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTNSO60931 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTNSO60931 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTNSO60931 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.19■□□□□ 0.66
CTNSO60931 AL355472.2-201ENST00000422958 438 ntBASIC19.19■□□□□ 0.66
CTNSO60931 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
CTNSO60931 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.19■□□□□ 0.66
CTNSO60931 AC104771.1-201ENST00000603335 964 ntBASIC19.19■□□□□ 0.66
CTNSO60931 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.19■□□□□ 0.66
CTNSO60931 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.19■□□□□ 0.66
CTNSO60931 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTNSO60931 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTNSO60931 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CTNSO60931 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.19■□□□□ 0.66
CTNSO60931 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTNSO60931 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTNSO60931 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.18■□□□□ 0.66
CTNSO60931 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTNSO60931 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTNSO60931 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTNSO60931 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTNSO60931 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTNSO60931 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTNSO60931 MIPEPP3-201ENST00000412105 444 ntBASIC19.18■□□□□ 0.66
CTNSO60931 HLA-L-209ENST00000420110 1011 ntBASIC19.18■□□□□ 0.66
CTNSO60931 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CTNSO60931 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CTNSO60931 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.18■□□□□ 0.66
CTNSO60931 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTNSO60931 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.18■□□□□ 0.66
CTNSO60931 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTNSO60931 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTNSO60931 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.18■□□□□ 0.66
CTNSO60931 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTNSO60931 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTNSO60931 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CTNSO60931 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNSO60931 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNSO60931 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.17■□□□□ 0.66
CTNSO60931 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.17■□□□□ 0.66
CTNSO60931 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.17■□□□□ 0.66
CTNSO60931 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTNSO60931 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNSO60931 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTNSO60931 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNSO60931 AC007225.1-201ENST00000566331 1836 ntBASIC19.17■□□□□ 0.66
CTNSO60931 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTNSO60931 BX276092.2-201ENST00000417668 665 ntBASIC19.17■□□□□ 0.66
CTNSO60931 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.17■□□□□ 0.66
CTNSO60931 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.17■□□□□ 0.66
CTNSO60931 AL356652.1-201ENST00000615962 565 ntBASIC19.17■□□□□ 0.66
CTNSO60931 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.17■□□□□ 0.66
CTNSO60931 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.17■□□□□ 0.66
CTNSO60931 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.17■□□□□ 0.66
CTNSO60931 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNSO60931 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CTNSO60931 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTNSO60931 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms