Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNT1O60563 CYP21A1P-202ENST00000354927 1481 ntBASIC23.27■■□□□ 1.32
CCNT1O60563 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNT1O60563 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCNT1O60563 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.27■■□□□ 1.32
CCNT1O60563 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
CCNT1O60563 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNT1O60563 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
CCNT1O60563 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
CCNT1O60563 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCNT1O60563 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
CCNT1O60563 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCNT1O60563 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC23.26■■□□□ 1.31
CCNT1O60563 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCNT1O60563 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
CCNT1O60563 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCNT1O60563 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.26■■□□□ 1.31
CCNT1O60563 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.26■■□□□ 1.31
CCNT1O60563 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.26■■□□□ 1.31
CCNT1O60563 AC083906.2-201ENST00000511578 360 ntBASIC23.26■■□□□ 1.31
CCNT1O60563 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.26■■□□□ 1.31
CCNT1O60563 MIR2861-201ENST00000636310 90 ntBASIC23.26■■□□□ 1.31
CCNT1O60563 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNT1O60563 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
CCNT1O60563 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.26■■□□□ 1.31
CCNT1O60563 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCNT1O60563 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCNT1O60563 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
CCNT1O60563 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNT1O60563 AL121603.2-201ENST00000557373 2117 ntBASIC23.26■■□□□ 1.31
CCNT1O60563 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CCNT1O60563 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCNT1O60563 AC010980.2-201ENST00000587099 1412 ntBASIC23.25■■□□□ 1.31
CCNT1O60563 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNT1O60563 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CCNT1O60563 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.25■■□□□ 1.31
CCNT1O60563 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNT1O60563 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCNT1O60563 AL512625.2-201ENST00000417533 625 ntBASIC23.25■■□□□ 1.31
CCNT1O60563 NCF1B-203ENST00000435988 1254 ntBASIC23.25■■□□□ 1.31
CCNT1O60563 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.25■■□□□ 1.31
CCNT1O60563 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.25■■□□□ 1.31
CCNT1O60563 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.25■■□□□ 1.31
CCNT1O60563 AL121832.2-201ENST00000610979 668 ntBASIC23.25■■□□□ 1.31
CCNT1O60563 AC100791.3-201ENST00000617619 330 ntBASIC23.25■■□□□ 1.31
CCNT1O60563 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNT1O60563 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNT1O60563 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCNT1O60563 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CCNT1O60563 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCNT1O60563 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCNT1O60563 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.24■■□□□ 1.31
CCNT1O60563 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.24■■□□□ 1.31
CCNT1O60563 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCNT1O60563 MCRIP2P1-201ENST00000394346 511 ntBASIC23.24■■□□□ 1.31
CCNT1O60563 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CCNT1O60563 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.24■■□□□ 1.31
CCNT1O60563 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCNT1O60563 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCNT1O60563 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.24■■□□□ 1.31
CCNT1O60563 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCNT1O60563 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCNT1O60563 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.24■■□□□ 1.31
CCNT1O60563 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCNT1O60563 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCNT1O60563 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCNT1O60563 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.23■■□□□ 1.31
CCNT1O60563 AL355472.2-201ENST00000422958 438 ntBASIC23.23■■□□□ 1.31
CCNT1O60563 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.23■■□□□ 1.31
CCNT1O60563 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.23■■□□□ 1.31
CCNT1O60563 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.23■■□□□ 1.31
CCNT1O60563 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.23■■□□□ 1.31
CCNT1O60563 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.23■■□□□ 1.31
CCNT1O60563 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
CCNT1O60563 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCNT1O60563 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.23■■□□□ 1.31
CCNT1O60563 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCNT1O60563 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCNT1O60563 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.23■■□□□ 1.31
CCNT1O60563 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCNT1O60563 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCNT1O60563 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.23■■□□□ 1.31
CCNT1O60563 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CCNT1O60563 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CCNT1O60563 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.22■■□□□ 1.31
CCNT1O60563 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.22■■□□□ 1.31
CCNT1O60563 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CCNT1O60563 GPX1P1-201ENST00000388829 606 ntBASIC23.22■■□□□ 1.31
CCNT1O60563 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.22■■□□□ 1.31
CCNT1O60563 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.22■■□□□ 1.31
CCNT1O60563 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.22■■□□□ 1.31
CCNT1O60563 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCNT1O60563 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.22■■□□□ 1.31
CCNT1O60563 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CCNT1O60563 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCNT1O60563 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCNT1O60563 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCNT1O60563 MKRN4P-201ENST00000444706 1521 ntBASIC23.22■■□□□ 1.31
CCNT1O60563 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCNT1O60563 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms