Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNX3O60493 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SNX3O60493 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNX3O60493 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
SNX3O60493 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNX3O60493 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.17■□□□□ 0.82
SNX3O60493 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNX3O60493 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNX3O60493 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNX3O60493 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNX3O60493 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNX3O60493 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SNX3O60493 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNX3O60493 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNX3O60493 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.16■□□□□ 0.82
SNX3O60493 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
SNX3O60493 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.16■□□□□ 0.82
SNX3O60493 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SNX3O60493 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNX3O60493 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNX3O60493 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNX3O60493 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNX3O60493 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.16■□□□□ 0.82
SNX3O60493 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
SNX3O60493 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNX3O60493 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNX3O60493 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SNX3O60493 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNX3O60493 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNX3O60493 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
SNX3O60493 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
SNX3O60493 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SNX3O60493 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNX3O60493 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNX3O60493 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
SNX3O60493 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SNX3O60493 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.15■□□□□ 0.82
SNX3O60493 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.15■□□□□ 0.82
SNX3O60493 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNX3O60493 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SNX3O60493 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.14■□□□□ 0.82
SNX3O60493 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SNX3O60493 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.14■□□□□ 0.81
SNX3O60493 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SNX3O60493 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
SNX3O60493 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SNX3O60493 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.14■□□□□ 0.81
SNX3O60493 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNX3O60493 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SNX3O60493 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.14■□□□□ 0.81
SNX3O60493 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.14■□□□□ 0.81
SNX3O60493 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNX3O60493 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNX3O60493 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SNX3O60493 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.14■□□□□ 0.81
SNX3O60493 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.14■□□□□ 0.81
SNX3O60493 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SNX3O60493 AC099791.2-201ENST00000605725 427 ntBASIC20.14■□□□□ 0.81
SNX3O60493 AC010997.5-201ENST00000609182 354 ntBASIC20.14■□□□□ 0.81
SNX3O60493 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
SNX3O60493 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.14■□□□□ 0.81
SNX3O60493 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SNX3O60493 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SNX3O60493 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNX3O60493 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SNX3O60493 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SNX3O60493 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNX3O60493 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SNX3O60493 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNX3O60493 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SNX3O60493 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNX3O60493 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNX3O60493 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.13■□□□□ 0.81
SNX3O60493 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.13■□□□□ 0.81
SNX3O60493 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.13■□□□□ 0.81
SNX3O60493 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNX3O60493 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNX3O60493 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SNX3O60493 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNX3O60493 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNX3O60493 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNX3O60493 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNX3O60493 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNX3O60493 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNX3O60493 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNX3O60493 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SNX3O60493 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNX3O60493 TMEM179-206ENST00000616017 1645 ntBASIC20.12■□□□□ 0.81
SNX3O60493 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNX3O60493 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNX3O60493 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SNX3O60493 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNX3O60493 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.12■□□□□ 0.81
SNX3O60493 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNX3O60493 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNX3O60493 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNX3O60493 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNX3O60493 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNX3O60493 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SNX3O60493 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms