Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXS1O43638 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXS1O43638 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FOXS1O43638 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
FOXS1O43638 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXS1O43638 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
FOXS1O43638 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXS1O43638 PGM5P4-201ENST00000421970 445 ntBASIC19.32■□□□□ 0.68
FOXS1O43638 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXS1O43638 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.32■□□□□ 0.68
FOXS1O43638 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.32■□□□□ 0.68
FOXS1O43638 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.32■□□□□ 0.68
FOXS1O43638 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FOXS1O43638 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
FOXS1O43638 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXS1O43638 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FOXS1O43638 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXS1O43638 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
FOXS1O43638 AC006128.1-201ENST00000624704 1661 ntBASIC19.31■□□□□ 0.68
FOXS1O43638 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXS1O43638 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXS1O43638 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXS1O43638 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXS1O43638 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXS1O43638 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
FOXS1O43638 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.31■□□□□ 0.68
FOXS1O43638 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXS1O43638 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
FOXS1O43638 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXS1O43638 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXS1O43638 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXS1O43638 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
FOXS1O43638 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXS1O43638 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXS1O43638 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.3■□□□□ 0.68
FOXS1O43638 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXS1O43638 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXS1O43638 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXS1O43638 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXS1O43638 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
FOXS1O43638 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXS1O43638 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.3■□□□□ 0.68
FOXS1O43638 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.3■□□□□ 0.68
FOXS1O43638 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXS1O43638 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXS1O43638 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.3■□□□□ 0.68
FOXS1O43638 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.3■□□□□ 0.68
FOXS1O43638 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXS1O43638 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXS1O43638 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXS1O43638 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.3■□□□□ 0.68
FOXS1O43638 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXS1O43638 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
FOXS1O43638 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXS1O43638 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXS1O43638 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXS1O43638 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXS1O43638 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
FOXS1O43638 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
FOXS1O43638 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXS1O43638 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
FOXS1O43638 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXS1O43638 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXS1O43638 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.29■□□□□ 0.68
FOXS1O43638 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXS1O43638 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.29■□□□□ 0.68
FOXS1O43638 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXS1O43638 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXS1O43638 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FOXS1O43638 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.29■□□□□ 0.68
FOXS1O43638 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.29■□□□□ 0.68
FOXS1O43638 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.29■□□□□ 0.68
FOXS1O43638 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.29■□□□□ 0.68
FOXS1O43638 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FOXS1O43638 CD99P1-205ENST00000527459 561 ntBASIC19.29■□□□□ 0.68
FOXS1O43638 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FOXS1O43638 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.29■□□□□ 0.68
FOXS1O43638 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FOXS1O43638 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXS1O43638 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXS1O43638 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXS1O43638 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXS1O43638 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXS1O43638 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXS1O43638 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXS1O43638 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXS1O43638 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXS1O43638 KRT8P36-201ENST00000489121 1440 ntBASIC19.28■□□□□ 0.68
FOXS1O43638 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXS1O43638 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXS1O43638 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXS1O43638 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FOXS1O43638 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.28■□□□□ 0.68
FOXS1O43638 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXS1O43638 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXS1O43638 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXS1O43638 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
FOXS1O43638 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXS1O43638 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FOXS1O43638 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms