Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.59□□□□□ -0.07
PAX4O43316 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC14.59□□□□□ -0.07
PAX4O43316 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PAX4O43316 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PAX4O43316 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PAX4O43316 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PAX4O43316 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PAX4O43316 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PAX4O43316 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
PAX4O43316 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PAX4O43316 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PAX4O43316 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PAX4O43316 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PAX4O43316 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PAX4O43316 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PAX4O43316 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
PAX4O43316 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PAX4O43316 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PAX4O43316 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14.58□□□□□ -0.08
PAX4O43316 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PAX4O43316 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.58□□□□□ -0.08
PAX4O43316 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.58□□□□□ -0.08
PAX4O43316 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.58□□□□□ -0.08
PAX4O43316 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PAX4O43316 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.58□□□□□ -0.08
PAX4O43316 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
PAX4O43316 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PAX4O43316 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
PAX4O43316 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PAX4O43316 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
PAX4O43316 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.58□□□□□ -0.08
PAX4O43316 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PAX4O43316 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PAX4O43316 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.58□□□□□ -0.08
PAX4O43316 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PAX4O43316 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PAX4O43316 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PAX4O43316 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PAX4O43316 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PAX4O43316 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.57□□□□□ -0.08
PAX4O43316 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
PAX4O43316 PALM-208ENST00000592155 2272 ntTSL 4 BASIC14.57□□□□□ -0.08
PAX4O43316 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.57□□□□□ -0.08
PAX4O43316 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PAX4O43316 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PAX4O43316 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PAX4O43316 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PAX4O43316 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PAX4O43316 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PAX4O43316 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.57□□□□□ -0.08
PAX4O43316 AC022517.1-201ENST00000592429 346 ntBASIC14.57□□□□□ -0.08
PAX4O43316 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.57□□□□□ -0.08
PAX4O43316 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.57□□□□□ -0.08
PAX4O43316 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PAX4O43316 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PAX4O43316 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PAX4O43316 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
PAX4O43316 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PAX4O43316 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PAX4O43316 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC14.57□□□□□ -0.08
PAX4O43316 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PAX4O43316 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PAX4O43316 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
PAX4O43316 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.57□□□□□ -0.08
PAX4O43316 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PAX4O43316 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PAX4O43316 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PAX4O43316 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
PAX4O43316 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PAX4O43316 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PAX4O43316 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PAX4O43316 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PAX4O43316 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.56□□□□□ -0.08
PAX4O43316 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.56□□□□□ -0.08
PAX4O43316 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PAX4O43316 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PAX4O43316 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.56□□□□□ -0.08
PAX4O43316 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.56□□□□□ -0.08
PAX4O43316 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.56□□□□□ -0.08
PAX4O43316 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PAX4O43316 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.56□□□□□ -0.08
PAX4O43316 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.56□□□□□ -0.08
PAX4O43316 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC14.56□□□□□ -0.08
PAX4O43316 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PAX4O43316 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PAX4O43316 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PAX4O43316 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PAX4O43316 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PAX4O43316 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PAX4O43316 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.56□□□□□ -0.08
PAX4O43316 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
PAX4O43316 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
PAX4O43316 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PAX4O43316 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PAX4O43316 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PAX4O43316 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC14.55□□□□□ -0.08
PAX4O43316 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.55□□□□□ -0.08
PAX4O43316 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.55□□□□□ -0.08
PAX4O43316 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14.55□□□□□ -0.08
PAX4O43316 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms