Protein–RNA interactions for Protein: O15111

CHUK, Inhibitor of nuclear factor kappa-B kinase subunit alpha, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHUKO15111 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHUKO15111 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHUKO15111 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHUKO15111 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHUKO15111 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CHUKO15111 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHUKO15111 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
CHUKO15111 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHUKO15111 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.97■□□□□ 0.95
CHUKO15111 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHUKO15111 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHUKO15111 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHUKO15111 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CHUKO15111 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHUKO15111 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHUKO15111 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHUKO15111 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.97■□□□□ 0.95
CHUKO15111 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.97■□□□□ 0.95
CHUKO15111 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CHUKO15111 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CHUKO15111 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHUKO15111 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHUKO15111 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHUKO15111 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHUKO15111 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHUKO15111 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHUKO15111 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHUKO15111 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHUKO15111 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHUKO15111 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHUKO15111 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHUKO15111 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.96■□□□□ 0.95
CHUKO15111 EEF1DP3-203ENST00000566025 782 ntBASIC20.96■□□□□ 0.95
CHUKO15111 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHUKO15111 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHUKO15111 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHUKO15111 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.96■□□□□ 0.95
CHUKO15111 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHUKO15111 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHUKO15111 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CHUKO15111 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHUKO15111 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHUKO15111 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.95■□□□□ 0.94
CHUKO15111 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHUKO15111 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHUKO15111 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHUKO15111 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.95■□□□□ 0.94
CHUKO15111 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHUKO15111 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.95■□□□□ 0.94
CHUKO15111 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHUKO15111 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CHUKO15111 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.95■□□□□ 0.94
CHUKO15111 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHUKO15111 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.95■□□□□ 0.94
CHUKO15111 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHUKO15111 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.95■□□□□ 0.94
CHUKO15111 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.95■□□□□ 0.94
CHUKO15111 AC104187.1-201ENST00000607510 612 ntBASIC20.95■□□□□ 0.94
CHUKO15111 AC092437.1-201ENST00000624794 1048 ntBASIC20.95■□□□□ 0.94
CHUKO15111 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHUKO15111 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHUKO15111 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CHUKO15111 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.95■□□□□ 0.94
CHUKO15111 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHUKO15111 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.95■□□□□ 0.94
CHUKO15111 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHUKO15111 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHUKO15111 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CHUKO15111 AC003102.1-202ENST00000563394 1796 ntBASIC20.95■□□□□ 0.94
CHUKO15111 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHUKO15111 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHUKO15111 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CHUKO15111 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHUKO15111 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.94■□□□□ 0.94
CHUKO15111 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHUKO15111 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHUKO15111 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CHUKO15111 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
CHUKO15111 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHUKO15111 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHUKO15111 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.94■□□□□ 0.94
CHUKO15111 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHUKO15111 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHUKO15111 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.94■□□□□ 0.94
CHUKO15111 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.94■□□□□ 0.94
CHUKO15111 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHUKO15111 AC053503.5-201ENST00000601508 636 ntBASIC20.94■□□□□ 0.94
CHUKO15111 IKBKGP1-201ENST00000612193 1073 ntBASIC20.94■□□□□ 0.94
CHUKO15111 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHUKO15111 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CHUKO15111 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CHUKO15111 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CHUKO15111 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.94■□□□□ 0.94
CHUKO15111 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHUKO15111 AC026471.6-201ENST00000622954 1905 ntBASIC20.94■□□□□ 0.94
CHUKO15111 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHUKO15111 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHUKO15111 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CHUKO15111 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CHUKO15111 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms