Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.42■□□□□ 0.22
UPK2O00526 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
UPK2O00526 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UPK2O00526 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UPK2O00526 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
UPK2O00526 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
UPK2O00526 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.41■□□□□ 0.22
UPK2O00526 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UPK2O00526 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
UPK2O00526 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
UPK2O00526 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
UPK2O00526 YBX1P1-201ENST00000445822 960 ntBASIC16.41■□□□□ 0.22
UPK2O00526 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.41■□□□□ 0.22
UPK2O00526 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.41■□□□□ 0.22
UPK2O00526 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
UPK2O00526 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UPK2O00526 AL391422.3-201ENST00000603791 2761 ntBASIC16.41■□□□□ 0.22
UPK2O00526 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UPK2O00526 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UPK2O00526 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
UPK2O00526 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UPK2O00526 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UPK2O00526 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
UPK2O00526 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UPK2O00526 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
UPK2O00526 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UPK2O00526 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.4■□□□□ 0.22
UPK2O00526 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
UPK2O00526 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.4■□□□□ 0.22
UPK2O00526 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UPK2O00526 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
UPK2O00526 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.4■□□□□ 0.22
UPK2O00526 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UPK2O00526 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
UPK2O00526 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.4■□□□□ 0.22
UPK2O00526 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.4■□□□□ 0.22
UPK2O00526 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UPK2O00526 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.4■□□□□ 0.22
UPK2O00526 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.4■□□□□ 0.22
UPK2O00526 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.4■□□□□ 0.22
UPK2O00526 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UPK2O00526 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
UPK2O00526 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UPK2O00526 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UPK2O00526 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
UPK2O00526 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.4■□□□□ 0.22
UPK2O00526 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
UPK2O00526 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UPK2O00526 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
UPK2O00526 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
UPK2O00526 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
UPK2O00526 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
UPK2O00526 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UPK2O00526 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UPK2O00526 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UPK2O00526 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
UPK2O00526 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.39■□□□□ 0.21
UPK2O00526 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
UPK2O00526 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UPK2O00526 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
UPK2O00526 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UPK2O00526 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.39■□□□□ 0.21
UPK2O00526 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UPK2O00526 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.39■□□□□ 0.21
UPK2O00526 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UPK2O00526 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
UPK2O00526 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UPK2O00526 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UPK2O00526 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UPK2O00526 AC099778.1-201ENST00000568593 1911 ntBASIC16.39■□□□□ 0.21
UPK2O00526 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
UPK2O00526 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UPK2O00526 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
UPK2O00526 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.38■□□□□ 0.21
UPK2O00526 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.38■□□□□ 0.21
UPK2O00526 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UPK2O00526 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UPK2O00526 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UPK2O00526 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.38■□□□□ 0.21
UPK2O00526 KRT18P14-201ENST00000534205 1250 ntBASIC16.38■□□□□ 0.21
UPK2O00526 AC243732.1-201ENST00000612648 864 ntBASIC16.38■□□□□ 0.21
UPK2O00526 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.38■□□□□ 0.21
UPK2O00526 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.38■□□□□ 0.21
UPK2O00526 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.38■□□□□ 0.21
UPK2O00526 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
UPK2O00526 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UPK2O00526 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.38■□□□□ 0.21
UPK2O00526 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UPK2O00526 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UPK2O00526 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
UPK2O00526 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
UPK2O00526 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK2O00526 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.37■□□□□ 0.21
UPK2O00526 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UPK2O00526 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
UPK2O00526 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK2O00526 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.37■□□□□ 0.21
UPK2O00526 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UPK2O00526 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK2O00526 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms