Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC01546A6NGU7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
LINC01546A6NGU7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC14.48□□□□□ -0.09
LINC01546A6NGU7 AC004987.1-201ENST00000428627 508 ntBASIC14.48□□□□□ -0.09
LINC01546A6NGU7 BX664725.1-201ENST00000438252 379 ntBASIC14.48□□□□□ -0.09
LINC01546A6NGU7 AC010525.1-201ENST00000585559 441 ntBASIC14.48□□□□□ -0.09
LINC01546A6NGU7 MTDHP2-201ENST00000601468 714 ntBASIC14.48□□□□□ -0.09
LINC01546A6NGU7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
LINC01546A6NGU7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01546A6NGU7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC01546A6NGU7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01546A6NGU7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.48□□□□□ -0.09
LINC01546A6NGU7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC01546A6NGU7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
LINC01546A6NGU7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC01546A6NGU7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01546A6NGU7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC01546A6NGU7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01546A6NGU7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01546A6NGU7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC01546A6NGU7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC01546A6NGU7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01546A6NGU7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01546A6NGU7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01546A6NGU7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01546A6NGU7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01546A6NGU7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01546A6NGU7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC01546A6NGU7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC01546A6NGU7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC01546A6NGU7 AP005435.1-201ENST00000529293 1178 ntBASIC14.47□□□□□ -0.09
LINC01546A6NGU7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
LINC01546A6NGU7 MIR3181-201ENST00000578512 73 ntBASIC14.47□□□□□ -0.09
LINC01546A6NGU7 AL691432.2-201ENST00000607222 2038 ntBASIC14.47□□□□□ -0.09
LINC01546A6NGU7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC01546A6NGU7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC01546A6NGU7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01546A6NGU7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01546A6NGU7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01546A6NGU7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01546A6NGU7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01546A6NGU7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.46□□□□□ -0.09
LINC01546A6NGU7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LINC01546A6NGU7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01546A6NGU7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01546A6NGU7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
LINC01546A6NGU7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LINC01546A6NGU7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LINC01546A6NGU7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01546A6NGU7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LINC01546A6NGU7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC14.46□□□□□ -0.09
LINC01546A6NGU7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC14.46□□□□□ -0.09
LINC01546A6NGU7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01546A6NGU7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LINC01546A6NGU7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01546A6NGU7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01546A6NGU7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC01546A6NGU7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC01546A6NGU7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC01546A6NGU7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.46□□□□□ -0.1
LINC01546A6NGU7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
LINC01546A6NGU7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
LINC01546A6NGU7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LINC01546A6NGU7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
LINC01546A6NGU7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.46□□□□□ -0.1
LINC01546A6NGU7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 NTF6A-201ENST00000591175 560 ntBASIC14.45□□□□□ -0.1
LINC01546A6NGU7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 LINC01465-201ENST00000408887 1940 ntBASIC14.45□□□□□ -0.1
LINC01546A6NGU7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC01546A6NGU7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01546A6NGU7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms