Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF222A6NCQ9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RNF222A6NCQ9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF222A6NCQ9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF222A6NCQ9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF222A6NCQ9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF222A6NCQ9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF222A6NCQ9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF222A6NCQ9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF222A6NCQ9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF222A6NCQ9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF222A6NCQ9 AC010141.3-201ENST00000456659 717 ntBASIC16.65■□□□□ 0.26
RNF222A6NCQ9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF222A6NCQ9 AC087239.1-201ENST00000622671 572 ntBASIC16.65■□□□□ 0.26
RNF222A6NCQ9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RNF222A6NCQ9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
RNF222A6NCQ9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF222A6NCQ9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RNF222A6NCQ9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF222A6NCQ9 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF222A6NCQ9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF222A6NCQ9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF222A6NCQ9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF222A6NCQ9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF222A6NCQ9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF222A6NCQ9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF222A6NCQ9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF222A6NCQ9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF222A6NCQ9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF222A6NCQ9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF222A6NCQ9 KRT18P60-201ENST00000312876 1297 ntBASIC16.64■□□□□ 0.25
RNF222A6NCQ9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF222A6NCQ9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RNF222A6NCQ9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF222A6NCQ9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF222A6NCQ9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF222A6NCQ9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF222A6NCQ9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF222A6NCQ9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF222A6NCQ9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.64■□□□□ 0.25
RNF222A6NCQ9 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
RNF222A6NCQ9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF222A6NCQ9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.64■□□□□ 0.25
RNF222A6NCQ9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
RNF222A6NCQ9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF222A6NCQ9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 AC011484.1-201ENST00000377652 1995 ntBASIC16.63■□□□□ 0.25
RNF222A6NCQ9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 BX005040.4-201ENST00000637145 1518 ntBASIC16.63■□□□□ 0.25
RNF222A6NCQ9 TREX1-205ENST00000625293 1783 ntBASIC16.63■□□□□ 0.25
RNF222A6NCQ9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 AL138781.2-201ENST00000617896 1843 ntBASIC16.63■□□□□ 0.25
RNF222A6NCQ9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
RNF222A6NCQ9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RNF222A6NCQ9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF222A6NCQ9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF222A6NCQ9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF222A6NCQ9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF222A6NCQ9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RNF222A6NCQ9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF222A6NCQ9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF222A6NCQ9 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF222A6NCQ9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF222A6NCQ9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RNF222A6NCQ9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF222A6NCQ9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF222A6NCQ9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RNF222A6NCQ9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.62■□□□□ 0.25
RNF222A6NCQ9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF222A6NCQ9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF222A6NCQ9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF222A6NCQ9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.62■□□□□ 0.25
RNF222A6NCQ9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF222A6NCQ9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms