Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.82■□□□□ 0.6
CDHR4A6H8M9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.82■□□□□ 0.6
CDHR4A6H8M9 MIR2861-201ENST00000636310 90 ntBASIC18.82■□□□□ 0.6
CDHR4A6H8M9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDHR4A6H8M9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CDHR4A6H8M9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.82■□□□□ 0.6
CDHR4A6H8M9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.82■□□□□ 0.6
CDHR4A6H8M9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDHR4A6H8M9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDHR4A6H8M9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDHR4A6H8M9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDHR4A6H8M9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDHR4A6H8M9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDHR4A6H8M9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CDHR4A6H8M9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.82■□□□□ 0.6
CDHR4A6H8M9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 AC007322.3-201ENST00000426526 701 ntBASIC18.81■□□□□ 0.6
CDHR4A6H8M9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDHR4A6H8M9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR4A6H8M9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR4A6H8M9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.8■□□□□ 0.6
CDHR4A6H8M9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR4A6H8M9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR4A6H8M9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CDHR4A6H8M9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR4A6H8M9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR4A6H8M9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR4A6H8M9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR4A6H8M9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR4A6H8M9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.8■□□□□ 0.6
CDHR4A6H8M9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
CDHR4A6H8M9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.8■□□□□ 0.6
CDHR4A6H8M9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR4A6H8M9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR4A6H8M9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CDHR4A6H8M9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR4A6H8M9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR4A6H8M9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR4A6H8M9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDHR4A6H8M9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 AL162377.1-201ENST00000618844 1793 ntBASIC18.79■□□□□ 0.6
CDHR4A6H8M9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.79■□□□□ 0.6
CDHR4A6H8M9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDHR4A6H8M9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CDHR4A6H8M9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.78■□□□□ 0.6
CDHR4A6H8M9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDHR4A6H8M9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.78■□□□□ 0.6
CDHR4A6H8M9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.78■□□□□ 0.6
CDHR4A6H8M9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDHR4A6H8M9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.78■□□□□ 0.6
CDHR4A6H8M9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms