Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.62■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.62■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.62■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.62■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.62■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.62■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.62■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 CYP2T1P-201ENST00000432607 1285 ntBASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 RARRES2P4-201ENST00000514074 484 ntBASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 AF201337.1-201ENST00000520239 748 ntBASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.6■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.6■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.6■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 AC105036.2-201ENST00000569468 176 ntBASIC18.6■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.6■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 AC069236.1-201ENST00000604339 616 ntBASIC18.6■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.6■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.59■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.59■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.59■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.59■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.59■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.59■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.59■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.59■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.59■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 AC008694.1-202ENST00000636953 945 ntBASIC18.59■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.59■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.59■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.58■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 AC007225.1-201ENST00000566331 1836 ntBASIC18.58■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TNFSF12-TNFSF13A0A0A6YY99 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 SLC29A4P1-201ENST00000398760 971 ntBASIC18.58■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 AL138781.1-201ENST00000566567 1274 ntBASIC18.58■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.58■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 OR10C1-204ENST00000622521 1039 ntBASIC18.58■□□□□ 0.56
TNFSF12-TNFSF13A0A0A6YY99 MIR2861-201ENST00000636310 90 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms