Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 EDA-201ENST00000338901 1233 ntBASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 AC110285.6-201ENST00000617652 491 ntBASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 AL355001.2-201ENST00000620617 1191 ntBASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRAV9-2A0A087WT02 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-2A0A087WT02 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-2A0A087WT02 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV9-2A0A087WT02 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-2A0A087WT02 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-2A0A087WT02 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV9-2A0A087WT02 PTCHD3P2-201ENST00000424937 1205 ntBASIC15.17■□□□□ 0.02
TRAV9-2A0A087WT02 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV9-2A0A087WT02 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV9-2A0A087WT02 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-2A0A087WT02 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV9-2A0A087WT02 AL158211.5-201ENST00000623583 2518 ntBASIC15.17■□□□□ 0.02
TRAV9-2A0A087WT02 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-2A0A087WT02 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-2A0A087WT02 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV9-2A0A087WT02 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-2A0A087WT02 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-2A0A087WT02 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV9-2A0A087WT02 AC019069.1-201ENST00000610008 1333 ntBASIC15.17■□□□□ 0.02
TRAV9-2A0A087WT02 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV9-2A0A087WT02 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 AC024257.2-201ENST00000549699 147 ntBASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 AC005837.3-201ENST00000612163 286 ntBASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 AL049796.1-201ENST00000565336 1766 ntBASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 AC020916.1-201ENST00000587762 1774 ntBASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TRAV9-2A0A087WT02 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 MIR638-201ENST00000385237 100 ntBASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 SERBP1P1-201ENST00000396021 1160 ntBASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 PTMA-205ENST00000410064 814 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 AC142381.2-201ENST00000566120 298 ntBASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 DUX4L4-201ENST00000566884 1269 ntBASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV9-2A0A087WT02 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.14■□□□□ 0.01
TRAV9-2A0A087WT02 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV9-2A0A087WT02 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms