Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AFG3L1P-217ENST00000557444 2447 ntBASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV27A0A087WT01 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV27A0A087WT01 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV27A0A087WT01 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV27A0A087WT01 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV27A0A087WT01 AL162377.1-201ENST00000618844 1793 ntBASIC18.53■□□□□ 0.56
TRAV27A0A087WT01 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV27A0A087WT01 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV27A0A087WT01 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.53■□□□□ 0.56
TRAV27A0A087WT01 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV27A0A087WT01 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.53■□□□□ 0.56
TRAV27A0A087WT01 CCDC92B-201ENST00000575506 885 ntBASIC18.53■□□□□ 0.56
TRAV27A0A087WT01 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV27A0A087WT01 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV27A0A087WT01 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV27A0A087WT01 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV27A0A087WT01 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV27A0A087WT01 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV27A0A087WT01 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV27A0A087WT01 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV27A0A087WT01 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV27A0A087WT01 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV27A0A087WT01 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV27A0A087WT01 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
TRAV27A0A087WT01 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV27A0A087WT01 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV27A0A087WT01 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV27A0A087WT01 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.52■□□□□ 0.56
TRAV27A0A087WT01 KRT18P14-201ENST00000534205 1250 ntBASIC18.52■□□□□ 0.56
TRAV27A0A087WT01 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.52■□□□□ 0.56
TRAV27A0A087WT01 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.52■□□□□ 0.56
TRAV27A0A087WT01 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAV27A0A087WT01 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAV27A0A087WT01 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV27A0A087WT01 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV27A0A087WT01 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
TRAV27A0A087WT01 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.52■□□□□ 0.55
TRAV27A0A087WT01 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.52■□□□□ 0.55
TRAV27A0A087WT01 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.52■□□□□ 0.55
TRAV27A0A087WT01 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
TRAV27A0A087WT01 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV27A0A087WT01 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV27A0A087WT01 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV27A0A087WT01 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV27A0A087WT01 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAV27A0A087WT01 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.51■□□□□ 0.55
TRAV27A0A087WT01 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV27A0A087WT01 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAV27A0A087WT01 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TRAV27A0A087WT01 AC092720.2-201ENST00000602388 1665 ntBASIC18.51■□□□□ 0.55
TRAV27A0A087WT01 AC004854.2-201ENST00000608450 1441 ntBASIC18.51■□□□□ 0.55
TRAV27A0A087WT01 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV27A0A087WT01 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV27A0A087WT01 AC116050.2-201ENST00000612102 1779 ntBASIC18.51■□□□□ 0.55
TRAV27A0A087WT01 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV27A0A087WT01 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TRAV27A0A087WT01 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV27A0A087WT01 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV27A0A087WT01 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.51■□□□□ 0.55
TRAV27A0A087WT01 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV27A0A087WT01 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV27A0A087WT01 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TRAV27A0A087WT01 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV27A0A087WT01 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAV27A0A087WT01 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV27A0A087WT01 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRAV27A0A087WT01 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV27A0A087WT01 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV27A0A087WT01 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV27A0A087WT01 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV27A0A087WT01 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV27A0A087WT01 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV27A0A087WT01 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV27A0A087WT01 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV27A0A087WT01 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV27A0A087WT01 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TRAV27A0A087WT01 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.5■□□□□ 0.55
TRAV27A0A087WT01 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV27A0A087WT01 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.5■□□□□ 0.55
TRAV27A0A087WT01 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV27A0A087WT01 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV27A0A087WT01 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
TRAV27A0A087WT01 AC099778.1-201ENST00000568593 1911 ntBASIC18.5■□□□□ 0.55
TRAV27A0A087WT01 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV27A0A087WT01 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRAV27A0A087WT01 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
TRAV27A0A087WT01 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV27A0A087WT01 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms