Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 DUX4L1-201ENST00000627662 1275 ntBASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 DUX4L8-201ENST00000629013 1275 ntBASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 DUX4L3-201ENST00000630187 1275 ntBASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 DUX4L7-201ENST00000630678 1275 ntBASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 DUX4L5-201ENST00000630834 1275 ntBASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV30A0A087WSZ9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV30A0A087WSZ9 FP700111.2-201ENST00000619190 1892 ntBASIC16.03■□□□□ 0.16
TRAV30A0A087WSZ9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV30A0A087WSZ9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV30A0A087WSZ9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAV30A0A087WSZ9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV30A0A087WSZ9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV30A0A087WSZ9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.03■□□□□ 0.16
TRAV30A0A087WSZ9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV30A0A087WSZ9 AC123595.1-201ENST00000440769 1046 ntBASIC16.03■□□□□ 0.16
TRAV30A0A087WSZ9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV30A0A087WSZ9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV30A0A087WSZ9 KRT18P20-201ENST00000548986 1279 ntBASIC16.03■□□□□ 0.16
TRAV30A0A087WSZ9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV30A0A087WSZ9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV30A0A087WSZ9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV30A0A087WSZ9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV30A0A087WSZ9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV30A0A087WSZ9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV30A0A087WSZ9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
TRAV30A0A087WSZ9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV30A0A087WSZ9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV30A0A087WSZ9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRAV30A0A087WSZ9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
TRAV30A0A087WSZ9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV30A0A087WSZ9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV30A0A087WSZ9 AC020907.5-201ENST00000624372 1936 ntBASIC16.02■□□□□ 0.16
TRAV30A0A087WSZ9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV30A0A087WSZ9 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV30A0A087WSZ9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRAV30A0A087WSZ9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.02■□□□□ 0.16
TRAV30A0A087WSZ9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV30A0A087WSZ9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV30A0A087WSZ9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV30A0A087WSZ9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV30A0A087WSZ9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV30A0A087WSZ9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV30A0A087WSZ9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV30A0A087WSZ9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
TRAV30A0A087WSZ9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
TRAV30A0A087WSZ9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV30A0A087WSZ9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV30A0A087WSZ9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
TRAV30A0A087WSZ9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV30A0A087WSZ9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV30A0A087WSZ9 AC073314.1-201ENST00000568729 2216 ntBASIC16.02■□□□□ 0.15
TRAV30A0A087WSZ9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV30A0A087WSZ9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV30A0A087WSZ9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV30A0A087WSZ9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV30A0A087WSZ9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV30A0A087WSZ9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV30A0A087WSZ9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV30A0A087WSZ9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV30A0A087WSZ9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV30A0A087WSZ9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRAV30A0A087WSZ9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV30A0A087WSZ9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRAV30A0A087WSZ9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRAV30A0A087WSZ9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.01■□□□□ 0.15
TRAV30A0A087WSZ9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV30A0A087WSZ9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.01■□□□□ 0.15
TRAV30A0A087WSZ9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV30A0A087WSZ9 RARRES2P11-201ENST00000635158 484 ntBASIC16.01■□□□□ 0.15
TRAV30A0A087WSZ9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV30A0A087WSZ9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV30A0A087WSZ9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV30A0A087WSZ9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV30A0A087WSZ9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV30A0A087WSZ9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV30A0A087WSZ9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV30A0A087WSZ9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
TRAV30A0A087WSZ9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV30A0A087WSZ9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV30A0A087WSZ9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16■□□□□ 0.15
TRAV30A0A087WSZ9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRAV30A0A087WSZ9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRAV30A0A087WSZ9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16■□□□□ 0.15
TRAV30A0A087WSZ9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV30A0A087WSZ9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV30A0A087WSZ9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRAV30A0A087WSZ9 CCDC92B-201ENST00000575506 885 ntBASIC16■□□□□ 0.15
TRAV30A0A087WSZ9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV30A0A087WSZ9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16■□□□□ 0.15
TRAV30A0A087WSZ9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TRAV30A0A087WSZ9 AC116050.2-201ENST00000612102 1779 ntBASIC16■□□□□ 0.15
TRAV30A0A087WSZ9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms