Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IGKV2-28A0A075B6P5 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
IGKV2-28A0A075B6P5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC13.51□□□□□ -0.25
IGKV2-28A0A075B6P5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC13.51□□□□□ -0.25
IGKV2-28A0A075B6P5 AC010525.1-201ENST00000585559 441 ntBASIC13.51□□□□□ -0.25
IGKV2-28A0A075B6P5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
IGKV2-28A0A075B6P5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.51□□□□□ -0.25
IGKV2-28A0A075B6P5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IGKV2-28A0A075B6P5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
IGKV2-28A0A075B6P5 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IGKV2-28A0A075B6P5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.51□□□□□ -0.25
IGKV2-28A0A075B6P5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 AP004607.7-201ENST00000527152 1677 ntBASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 SYT6-210ENST00000641643 1587 ntBASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 AP000974.1-201ENST00000623909 2387 ntBASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 TCF3P1-201ENST00000423021 1937 ntBASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.5□□□□□ -0.25
IGKV2-28A0A075B6P5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IGKV2-28A0A075B6P5 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 TNXA-203ENST00000507684 2038 ntBASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 HES6-206ENST00000409574 738 ntTSL 2 BASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 AL356441.2-201ENST00000443009 864 ntBASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 AL512631.2-201ENST00000604634 923 ntBASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IGKV2-28A0A075B6P5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
IGKV2-28A0A075B6P5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms