Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 AC126544.1-201ENST00000580842 1059 ntBASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRBV25-1A0A075B6N4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRBV25-1A0A075B6N4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRBV25-1A0A075B6N4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRBV25-1A0A075B6N4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRBV25-1A0A075B6N4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 MIR4767-201ENST00000582827 78 ntBASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRBV25-1A0A075B6N4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TRBV25-1A0A075B6N4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV25-1A0A075B6N4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV25-1A0A075B6N4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV25-1A0A075B6N4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TRBV25-1A0A075B6N4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV25-1A0A075B6N4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV25-1A0A075B6N4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRBV25-1A0A075B6N4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC14.69□□□□□ -0.06
TRBV25-1A0A075B6N4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TRBV25-1A0A075B6N4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV25-1A0A075B6N4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRBV25-1A0A075B6N4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRBV25-1A0A075B6N4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV25-1A0A075B6N4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV25-1A0A075B6N4 UNC93B3-201ENST00000308076 687 ntBASIC14.69□□□□□ -0.06
TRBV25-1A0A075B6N4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRBV25-1A0A075B6N4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms