Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 RPA1-201ENST00000254719 4340 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
P04436 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 MUSK-201ENST00000189978 2408 ntTSL 5 BASIC8.24□□□□□ -1.09
P04436 MUSK-204ENST00000374440 2408 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 UVRAG-208ENST00000532130 1831 ntTSL 2 BASIC8.24□□□□□ -1.09
P04436 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 AP000289.1-201ENST00000421051 1361 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 FMO9P-201ENST00000477875 1364 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 NOP2-218ENST00000545200 2751 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 CALML3-AS1-202ENST00000543008 4531 ntTSL 5 BASIC8.24□□□□□ -1.09
P04436 LRTOMT-222ENST00000615940 1895 ntTSL 5 BASIC8.24□□□□□ -1.09
P04436 HTR4-202ENST00000362016 2979 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 NCKAP1L-202ENST00000545638 3612 ntTSL 2 BASIC8.24□□□□□ -1.09
P04436 LINC01484-203ENST00000521128 2361 ntTSL 2 BASIC8.24□□□□□ -1.09
P04436 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC8.24□□□□□ -1.09
P04436 MAS1L-201ENST00000377127 1260 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
P04436 IGLV3-1-201ENST00000390319 398 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
P04436 AL031864.1-201ENST00000392075 423 ntBASIC8.24□□□□□ -1.09
P04436 BRCC3-206ENST00000399042 954 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
P04436 ZNF839P1-201ENST00000403487 861 ntBASIC8.24□□□□□ -1.09
P04436 AL590286.1-201ENST00000404178 291 ntBASIC8.24□□□□□ -1.09
P04436 TUBB4BP7-201ENST00000406999 1234 ntBASIC8.24□□□□□ -1.09
P04436 AP001062.2-201ENST00000426029 127 ntTSL 3 BASIC8.24□□□□□ -1.09
P04436 PAICSP3-201ENST00000428007 1168 ntBASIC8.24□□□□□ -1.09
P04436 NR1I3-209ENST00000428574 1117 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 AL137793.1-201ENST00000433734 599 ntTSL 3 BASIC8.24□□□□□ -1.09
P04436 PCBP1-AS1-233ENST00000442326 668 ntTSL 3 BASIC8.24□□□□□ -1.09
P04436 NR1I3-211ENST00000442691 1114 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 ZNF90P3-201ENST00000450345 1192 ntBASIC8.24□□□□□ -1.09
P04436 AC093270.1-201ENST00000482584 486 ntBASIC8.24□□□□□ -1.09
P04436 AC080079.1-201ENST00000509326 1045 ntBASIC8.24□□□□□ -1.09
P04436 NR1I3-228ENST00000511676 1061 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 NR1I3-230ENST00000511944 620 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 NR1I3-232ENST00000512372 861 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 NR1I3-234ENST00000515621 1130 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 AC009652.1-201ENST00000528326 648 ntTSL 5 BASIC8.24□□□□□ -1.09
P04436 AP002360.1-204ENST00000529331 700 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
P04436 AC027288.3-203ENST00000553165 448 ntTSL 3 BASIC8.24□□□□□ -1.09
P04436 LINC02321-201ENST00000555975 384 ntTSL 3 BASIC8.24□□□□□ -1.09
P04436 AC025280.1-201ENST00000562393 260 ntTSL 2 BASIC8.24□□□□□ -1.09
P04436 RPL23AP86-201ENST00000573796 541 ntBASIC8.24□□□□□ -1.09
P04436 AC103810.2-201ENST00000577938 559 ntTSL 5 BASIC8.24□□□□□ -1.09
P04436 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC8.24□□□□□ -1.09
P04436 RN7SL804P-201ENST00000582466 298 ntBASIC8.24□□□□□ -1.09
P04436 AC103810.1-203ENST00000583052 599 ntTSL 4 BASIC8.24□□□□□ -1.09
P04436 AP001017.1-201ENST00000591378 482 ntBASIC8.24□□□□□ -1.09
P04436 HDAC1P2-202ENST00000602936 807 ntBASIC8.24□□□□□ -1.09
P04436 AC112219.2-201ENST00000608390 532 ntBASIC8.24□□□□□ -1.09
P04436 AC007336.2-201ENST00000611626 557 ntBASIC8.24□□□□□ -1.09
P04436 PPARGC1A-218ENST00000617484 1026 ntTSL 5 BASIC8.24□□□□□ -1.09
P04436 PCAT14-203ENST00000629869 976 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 BRCC3-210ENST00000630295 954 ntTSL 5 BASIC8.24□□□□□ -1.09
P04436 C1orf132-204ENST00000637970 1170 ntTSL 5 BASIC8.24□□□□□ -1.09
P04436 ZNF565-203ENST00000392173 1931 ntAPPRIS P2 TSL 2 BASIC8.24□□□□□ -1.09
P04436 ALG13-225ENST00000621367 3893 ntTSL 2 BASIC8.24□□□□□ -1.09
P04436 BDNF-216ENST00000532997 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 C7orf71-201ENST00000409974 1956 ntTSL 2 BASIC8.24□□□□□ -1.09
P04436 TBC1D22A-AS1-202ENST00000640274 1951 ntBASIC8.24□□□□□ -1.09
P04436 FBXL13-202ENST00000379305 2478 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 STYK1-201ENST00000075503 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 SLMAP-219ENST00000494088 1305 ntTSL 2 BASIC8.24□□□□□ -1.09
P04436 MEIS1-212ENST00000495021 2836 ntTSL 2 BASIC8.24□□□□□ -1.09
P04436 TRERF1-201ENST00000340840 4174 ntTSL 5 BASIC8.24□□□□□ -1.09
P04436 RNF212B-202ENST00000399910 1670 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
P04436 AC018647.1-202ENST00000449644 1651 ntTSL 5 BASIC8.24□□□□□ -1.09
P04436 TRIM39-202ENST00000376659 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 OIT3-201ENST00000334011 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 ERVMER61-1-201ENST00000429725 2393 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
P04436 FTSJ3-201ENST00000427159 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
P04436 PDPN-212ENST00000621990 2738 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
P04436 ZNF525-203ENST00000475179 1868 ntTSL 2 BASIC8.23□□□□□ -1.09
P04436 AC021491.4-201ENST00000620769 2573 ntBASIC8.23□□□□□ -1.09
P04436 B2M-204ENST00000558401 1715 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
P04436 KLHL1-202ENST00000545028 3966 ntTSL 2 BASIC8.23□□□□□ -1.09
P04436 AL392183.1-201ENST00000606622 2436 ntTSL 4 BASIC8.23□□□□□ -1.09
P04436 LINC01761-201ENST00000424943 2755 ntTSL 2 BASIC8.23□□□□□ -1.09
P04436 SMIM7-208ENST00000487416 2776 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
P04436 OGDH-207ENST00000449767 3479 ntAPPRIS ALT1 TSL 2 BASIC8.23□□□□□ -1.09
P04436 EPS15L1-212ENST00000597937 3486 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
P04436 RCAN1-207ENST00000481448 2816 ntTSL 5 BASIC8.23□□□□□ -1.09
P04436 ANO2-201ENST00000327087 3720 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
P04436 CLRN1-201ENST00000295911 1444 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
P04436 WDR92-202ENST00000406245 1401 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
P04436 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
P04436 UBAP2L-201ENST00000271877 3997 ntTSL 5 BASIC8.23□□□□□ -1.09
P04436 XRCC2-201ENST00000359321 3067 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
P04436 DEFA5-201ENST00000330590 449 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
P04436 RN7SKP72-201ENST00000362327 292 ntBASIC8.23□□□□□ -1.09
P04436 KRTAP20-3-201ENST00000382826 273 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
P04436 U3.38-201ENST00000408534 216 ntBASIC8.23□□□□□ -1.09
P04436 GULP1-205ENST00000409805 983 ntTSL 2 BASIC8.23□□□□□ -1.09
P04436 AC068051.1-201ENST00000412896 442 ntTSL 4 BASIC8.23□□□□□ -1.09
P04436 UST-AS1-201ENST00000413845 714 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
P04436 SNHG26-202ENST00000422542 1106 ntTSL 3 BASIC8.23□□□□□ -1.09
P04436 FGL1-205ENST00000427924 1247 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
P04436 AC112907.1-201ENST00000434957 540 ntTSL 4 BASIC8.23□□□□□ -1.09
P04436 AC012501.2-201ENST00000437634 1281 ntBASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms