Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PRAMEF10-201ENST00000235347 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SLC1A1P43005 LRRC4C-204ENST00000530763 2669 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SLC1A1P43005 FOLH1B-201ENST00000525540 1974 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SLC1A1P43005 WISP3-201ENST00000230529 1235 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
SLC1A1P43005 SCGB2A1-201ENST00000244930 521 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SLC1A1P43005 TAS2R60-201ENST00000332690 957 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
SLC1A1P43005 AC009967.1-201ENST00000379462 793 ntBASIC9.38□□□□□ -0.91
SLC1A1P43005 HMGN1-202ENST00000380747 709 ntTSL 3 BASIC9.38□□□□□ -0.91
SLC1A1P43005 MIR503-201ENST00000385270 71 ntBASIC9.38□□□□□ -0.91
SLC1A1P43005 SNORA48-201ENST00000386847 135 ntBASIC9.38□□□□□ -0.91
SLC1A1P43005 TRAV13-2-201ENST00000390439 410 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
SLC1A1P43005 AC114492.1-201ENST00000434936 454 ntBASIC9.38□□□□□ -0.91
SLC1A1P43005 AC002480.3-201ENST00000439823 557 ntTSL 3 BASIC9.38□□□□□ -0.91
SLC1A1P43005 RPL23P4-201ENST00000442836 416 ntBASIC9.38□□□□□ -0.91
SLC1A1P43005 AL512353.1-203ENST00000444563 610 ntTSL 2 BASIC9.38□□□□□ -0.91
SLC1A1P43005 AL669970.1-201ENST00000444936 450 ntTSL 2 BASIC9.38□□□□□ -0.91
SLC1A1P43005 ITPKB-AS1-201ENST00000453525 538 ntTSL 2 BASIC9.38□□□□□ -0.91
SLC1A1P43005 RN7SL507P-201ENST00000474076 296 ntBASIC9.38□□□□□ -0.91
SLC1A1P43005 AC018450.2-201ENST00000492307 368 ntTSL 3 BASIC9.38□□□□□ -0.91
SLC1A1P43005 NREP-219ENST00000509979 771 ntTSL 4 BASIC9.38□□□□□ -0.91
SLC1A1P43005 DCAF13-203ENST00000519682 837 ntTSL 2 BASIC9.38□□□□□ -0.91
SLC1A1P43005 AC091980.1-201ENST00000524262 288 ntBASIC9.38□□□□□ -0.91
SLC1A1P43005 RBM4B-207ENST00000531969 769 ntTSL 3 BASIC9.38□□□□□ -0.91
SLC1A1P43005 ZNF826P-202ENST00000542380 1067 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SLC1A1P43005 AC008014.1-201ENST00000551503 829 ntTSL 3 BASIC9.38□□□□□ -0.91
SLC1A1P43005 RN7SL15P-201ENST00000582825 301 ntBASIC9.38□□□□□ -0.91
SLC1A1P43005 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC9.38□□□□□ -0.91
SLC1A1P43005 TEX26-AS1-217ENST00000593246 797 ntTSL 5 BASIC9.38□□□□□ -0.91
SLC1A1P43005 CR769775.3-201ENST00000610388 219 ntBASIC9.38□□□□□ -0.91
SLC1A1P43005 AC108125.1-201ENST00000622310 543 ntBASIC9.38□□□□□ -0.91
SLC1A1P43005 SMIM11B-204ENST00000623661 1021 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
SLC1A1P43005 AL662791.5-202ENST00000623946 461 ntTSL 2 BASIC9.38□□□□□ -0.91
SLC1A1P43005 AL357143.2-201ENST00000640266 421 ntBASIC9.38□□□□□ -0.91
SLC1A1P43005 ICK-201ENST00000350082 6116 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SLC1A1P43005 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SLC1A1P43005 NFIA-206ENST00000371191 1916 ntTSL 5 BASIC9.38□□□□□ -0.91
SLC1A1P43005 MEF2C-229ENST00000627659 2393 ntTSL 5 BASIC9.38□□□□□ -0.91
SLC1A1P43005 MCM6-201ENST00000264156 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SLC1A1P43005 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC9.38□□□□□ -0.91
SLC1A1P43005 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SLC1A1P43005 C16orf62-205ENST00000513947 2501 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SLC1A1P43005 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SLC1A1P43005 LINC02011-201ENST00000566553 3830 ntTSL 2 BASIC9.38□□□□□ -0.91
SLC1A1P43005 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SLC1A1P43005 CCNK-201ENST00000389879 3524 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
SLC1A1P43005 C3P1-202ENST00000497718 4954 ntBASIC9.37□□□□□ -0.91
SLC1A1P43005 EEF1A1P7-201ENST00000596811 1394 ntBASIC9.37□□□□□ -0.91
SLC1A1P43005 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
SLC1A1P43005 NVL-216ENST00000482491 3003 ntTSL 5 BASIC9.37□□□□□ -0.91
SLC1A1P43005 CDH13-202ENST00000428848 2195 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
SLC1A1P43005 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SLC1A1P43005 UACA-203ENST00000539319 4026 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SLC1A1P43005 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SLC1A1P43005 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SLC1A1P43005 SERPINA9-203ENST00000380365 1333 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
SLC1A1P43005 PSMC1P9-201ENST00000396338 1335 ntBASIC9.37□□□□□ -0.91
SLC1A1P43005 CEACAM8-201ENST00000244336 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SLC1A1P43005 LINC00284-202ENST00000439707 2521 ntTSL 5 BASIC9.37□□□□□ -0.91
SLC1A1P43005 MYH2-204ENST00000532183 2528 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SLC1A1P43005 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
SLC1A1P43005 CCDC144B-201ENST00000285176 4310 ntBASIC9.37□□□□□ -0.91
SLC1A1P43005 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SLC1A1P43005 PREPL-208ENST00000410081 3080 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
SLC1A1P43005 RSPO2-203ENST00000517939 2487 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SLC1A1P43005 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SLC1A1P43005 PTH-201ENST00000282091 813 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SLC1A1P43005 AL137784.1-201ENST00000407121 745 ntBASIC9.37□□□□□ -0.91
SLC1A1P43005 AC097059.2-201ENST00000414039 592 ntTSL 3 BASIC9.37□□□□□ -0.91
SLC1A1P43005 LINC01105-202ENST00000431182 708 ntTSL 4 BASIC9.37□□□□□ -0.91
SLC1A1P43005 AC005588.1-201ENST00000439168 162 ntBASIC9.37□□□□□ -0.91
SLC1A1P43005 UBE2D4-206ENST00000446008 783 ntTSL 2 BASIC9.37□□□□□ -0.91
SLC1A1P43005 AL078599.2-201ENST00000457116 471 ntTSL 3 BASIC9.37□□□□□ -0.91
SLC1A1P43005 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC9.37□□□□□ -0.91
SLC1A1P43005 AL672142.1-201ENST00000482796 378 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
SLC1A1P43005 RN7SL209P-201ENST00000488309 276 ntBASIC9.37□□□□□ -0.91
SLC1A1P43005 AC010457.1-202ENST00000510137 337 ntTSL 2 BASIC9.37□□□□□ -0.91
SLC1A1P43005 AC114324.2-201ENST00000510435 680 ntTSL 3 BASIC9.37□□□□□ -0.91
SLC1A1P43005 AC046195.2-201ENST00000519652 541 ntTSL 4 BASIC9.37□□□□□ -0.91
SLC1A1P43005 ATM-209ENST00000526567 560 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SLC1A1P43005 INTS4-205ENST00000527522 956 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SLC1A1P43005 AC156455.1-202ENST00000540968 587 ntTSL 4 BASIC9.37□□□□□ -0.91
SLC1A1P43005 AL591767.2-201ENST00000554984 173 ntBASIC9.37□□□□□ -0.91
SLC1A1P43005 AL133163.2-201ENST00000555024 624 ntTSL 3 BASIC9.37□□□□□ -0.91
SLC1A1P43005 ZFP14-202ENST00000589280 642 ntTSL 3 BASIC9.37□□□□□ -0.91
SLC1A1P43005 BOLA2P2-202ENST00000604904 567 ntBASIC9.37□□□□□ -0.91
SLC1A1P43005 AC007389.1-208ENST00000607539 512 ntTSL 4 BASIC9.37□□□□□ -0.91
SLC1A1P43005 MIR6511A2-201ENST00000611011 67 ntBASIC9.37□□□□□ -0.91
SLC1A1P43005 C5orf67-202ENST00000611197 354 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
SLC1A1P43005 MIR6511A3-201ENST00000615389 67 ntBASIC9.37□□□□□ -0.91
SLC1A1P43005 MIR6511A4-201ENST00000615860 67 ntBASIC9.37□□□□□ -0.91
SLC1A1P43005 MIR6511A1-201ENST00000617664 67 ntBASIC9.37□□□□□ -0.91
SLC1A1P43005 TRIO-225ENST00000639876 769 ntTSL 5 BASIC9.37□□□□□ -0.91
SLC1A1P43005 XRCC6P1-201ENST00000420392 1805 ntBASIC9.37□□□□□ -0.91
SLC1A1P43005 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SLC1A1P43005 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
SLC1A1P43005 PRCP-202ENST00000393399 2120 ntTSL 2 BASIC9.37□□□□□ -0.91
SLC1A1P43005 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SLC1A1P43005 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SLC1A1P43005 NUSAP1-212ENST00000560747 2256 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
SLC1A1P43005 AC008026.3-201ENST00000583426 1707 ntTSL 2 BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms