Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 IMP3P1-201ENST00000427532 557 ntBASIC9.44□□□□□ -0.9
SLC1A1P43005 FAM136BP-201ENST00000428729 417 ntBASIC9.44□□□□□ -0.9
SLC1A1P43005 AP001619.1-201ENST00000432411 447 ntTSL 3 BASIC9.44□□□□□ -0.9
SLC1A1P43005 AL513122.2-201ENST00000437135 838 ntTSL 3 BASIC9.44□□□□□ -0.9
SLC1A1P43005 LINC01803-201ENST00000438659 613 ntTSL 2 BASIC9.44□□□□□ -0.9
SLC1A1P43005 HNRNPA1P39-201ENST00000440547 960 ntBASIC9.44□□□□□ -0.9
SLC1A1P43005 AC105265.1-201ENST00000479379 179 ntBASIC9.44□□□□□ -0.9
SLC1A1P43005 AC130651.1-201ENST00000482912 598 ntBASIC9.44□□□□□ -0.9
SLC1A1P43005 PPIAP11-201ENST00000510729 493 ntBASIC9.44□□□□□ -0.9
SLC1A1P43005 LINC01438-201ENST00000512794 556 ntTSL 4 BASIC9.44□□□□□ -0.9
SLC1A1P43005 APOBEC3B-AS1-201ENST00000513758 691 ntTSL 3 BASIC9.44□□□□□ -0.9
SLC1A1P43005 AC018716.1-201ENST00000534604 561 ntTSL 4 BASIC9.44□□□□□ -0.9
SLC1A1P43005 TMIGD1-202ENST00000538566 1124 ntTSL 2 BASIC9.44□□□□□ -0.9
SLC1A1P43005 AC089998.3-201ENST00000549715 493 ntBASIC9.44□□□□□ -0.9
SLC1A1P43005 AL117190.2-201ENST00000554041 289 ntTSL 2 BASIC9.44□□□□□ -0.9
SLC1A1P43005 AC023906.5-201ENST00000558607 635 ntTSL 2 BASIC9.44□□□□□ -0.9
SLC1A1P43005 AC093249.3-201ENST00000562444 424 ntBASIC9.44□□□□□ -0.9
SLC1A1P43005 AC015818.2-201ENST00000563569 840 ntBASIC9.44□□□□□ -0.9
SLC1A1P43005 LSM3P5-201ENST00000566307 306 ntBASIC9.44□□□□□ -0.9
SLC1A1P43005 AL365214.3-204ENST00000587816 894 ntAPPRIS P5 TSL 5 BASIC9.44□□□□□ -0.9
SLC1A1P43005 EIF3H-212ENST00000611080 1265 ntTSL 5 BASIC9.44□□□□□ -0.9
SLC1A1P43005 PHBP6-201ENST00000614021 786 ntBASIC9.44□□□□□ -0.9
SLC1A1P43005 AP001767.4-201ENST00000624584 452 ntBASIC9.44□□□□□ -0.9
SLC1A1P43005 AL390726.6-203ENST00000636076 473 ntBASIC9.44□□□□□ -0.9
SLC1A1P43005 DDX10-203ENST00000526794 6707 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SLC1A1P43005 RNF141-202ENST00000528665 1374 ntTSL 2 BASIC9.44□□□□□ -0.9
SLC1A1P43005 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SLC1A1P43005 ALDH7A1P1-201ENST00000510973 1533 ntBASIC9.44□□□□□ -0.9
SLC1A1P43005 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
SLC1A1P43005 AL590491.1-201ENST00000611916 1988 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SLC1A1P43005 AC092329.4-202ENST00000638174 1989 ntTSL 2 BASIC9.44□□□□□ -0.9
SLC1A1P43005 MSL3P1-201ENST00000438684 2032 ntTSL 2 BASIC9.44□□□□□ -0.9
SLC1A1P43005 AL845331.3-201ENST00000562821 2028 ntTSL 2 BASIC9.44□□□□□ -0.9
SLC1A1P43005 LINC01411-203ENST00000507361 2098 ntTSL 3 BASIC9.44□□□□□ -0.9
SLC1A1P43005 PRR11-201ENST00000262293 2332 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SLC1A1P43005 CLEC1A-201ENST00000315330 2685 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
SLC1A1P43005 CR786580.1-201ENST00000417843 2878 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SLC1A1P43005 LINC01410-201ENST00000424345 2877 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SLC1A1P43005 ACVR1-201ENST00000263640 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SLC1A1P43005 IST1-226ENST00000606369 3583 ntTSL 2 BASIC9.44□□□□□ -0.9
SLC1A1P43005 PSEN1-205ENST00000406768 4062 ntTSL 2 BASIC9.44□□□□□ -0.9
SLC1A1P43005 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SLC1A1P43005 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC9.43□□□□□ -0.9
SLC1A1P43005 HDAC9-229ENST00000622668 4279 ntTSL 2 BASIC9.43□□□□□ -0.9
SLC1A1P43005 ERMAP-201ENST00000328249 3949 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SLC1A1P43005 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC9.43□□□□□ -0.9
SLC1A1P43005 SEMA3E-202ENST00000427262 2414 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
SLC1A1P43005 CTAGE9-201ENST00000314099 2334 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
SLC1A1P43005 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SLC1A1P43005 MTHFD2-203ENST00000409804 1757 ntTSL 5 BASIC9.43□□□□□ -0.9
SLC1A1P43005 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC9.43□□□□□ -0.9
SLC1A1P43005 RBM18-201ENST00000417201 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SLC1A1P43005 CAB39-207ENST00000614925 1619 ntTSL 5 BASIC9.43□□□□□ -0.9
SLC1A1P43005 LINC00210-201ENST00000431637 1584 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SLC1A1P43005 CCDC47-207ENST00000612558 1586 ntTSL 5 BASIC9.43□□□□□ -0.9
SLC1A1P43005 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SLC1A1P43005 IKZF3-209ENST00000377952 1435 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SLC1A1P43005 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SLC1A1P43005 MRPL55-216ENST00000366744 726 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
SLC1A1P43005 S100A4-204ENST00000368716 600 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SLC1A1P43005 DPM1-203ENST00000371588 1075 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SLC1A1P43005 PMP22-204ENST00000426385 571 ntTSL 2 BASIC9.43□□□□□ -0.9
SLC1A1P43005 HLA-T-206ENST00000429813 450 ntBASIC9.43□□□□□ -0.9
SLC1A1P43005 FXYD6P2-201ENST00000444174 288 ntBASIC9.43□□□□□ -0.9
SLC1A1P43005 PRDX2P1-201ENST00000450181 589 ntBASIC9.43□□□□□ -0.9
SLC1A1P43005 AC119424.1-201ENST00000472513 350 ntTSL 5 BASIC9.43□□□□□ -0.9
SLC1A1P43005 AC121161.2-201ENST00000502566 659 ntTSL 3 BASIC9.43□□□□□ -0.9
SLC1A1P43005 AC106872.7-201ENST00000508621 312 ntBASIC9.43□□□□□ -0.9
SLC1A1P43005 S100Z-202ENST00000513010 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SLC1A1P43005 AC107074.1-201ENST00000513617 764 ntTSL 3 BASIC9.43□□□□□ -0.9
SLC1A1P43005 RNU1-125P-201ENST00000516752 129 ntBASIC9.43□□□□□ -0.9
SLC1A1P43005 AF121898.1-203ENST00000518494 826 ntTSL 3 BASIC9.43□□□□□ -0.9
SLC1A1P43005 GLYATL1P3-201ENST00000527482 909 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
SLC1A1P43005 ZNF350-AS1-201ENST00000595010 698 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SLC1A1P43005 ACTG1P22-202ENST00000605503 859 ntTSL 4 BASIC9.43□□□□□ -0.9
SLC1A1P43005 AC245595.2-202ENST00000611488 1197 ntBASIC9.43□□□□□ -0.9
SLC1A1P43005 S100Z-203ENST00000613039 671 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SLC1A1P43005 AC002401.3-201ENST00000620020 440 ntBASIC9.43□□□□□ -0.9
SLC1A1P43005 Metazoa_SRP.208-201ENST00000629083 297 ntBASIC9.43□□□□□ -0.9
SLC1A1P43005 ERMAP-203ENST00000372517 3423 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SLC1A1P43005 PRR27-202ENST00000502294 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SLC1A1P43005 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC9.43□□□□□ -0.9
SLC1A1P43005 CDHR3-211ENST00000478080 2633 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
SLC1A1P43005 PHLDB2-207ENST00000477695 5813 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SLC1A1P43005 SH3BP5-AS1-202ENST00000420195 5570 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SLC1A1P43005 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
SLC1A1P43005 AL161636.1-201ENST00000427145 2254 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SLC1A1P43005 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SLC1A1P43005 AL353132.1-201ENST00000415260 2043 ntBASIC9.43□□□□□ -0.9
SLC1A1P43005 SLC24A1-203ENST00000399033 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SLC1A1P43005 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC9.42□□□□□ -0.9
SLC1A1P43005 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
SLC1A1P43005 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SLC1A1P43005 PPM1A-201ENST00000325642 1713 ntTSL 2 BASIC9.42□□□□□ -0.9
SLC1A1P43005 KRIT1-204ENST00000394507 4762 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SLC1A1P43005 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SLC1A1P43005 PPP1R11-203ENST00000376765 1536 ntTSL 3 BASIC9.42□□□□□ -0.9
SLC1A1P43005 WISP3-202ENST00000361714 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SLC1A1P43005 PCBP2-207ENST00000546463 1457 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SLC1A1P43005 FLI1-202ENST00000344954 3427 ntTSL 2 BASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms