Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL139353.2-201ENST00000549844 699 ntTSL 3 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 AC245033.1-201ENST00000562833 880 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 AC004706.2-201ENST00000576277 294 ntBASIC8.36□□□□□ -1.07
SNX18Q96RF0 AC005154.4-201ENST00000579437 427 ntTSL 3 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 FAM222B-214ENST00000583953 564 ntTSL 4 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 TEX26-AS1-210ENST00000588726 841 ntTSL 5 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 GMFG-204ENST00000595636 487 ntTSL 2 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 MIR6777-201ENST00000613934 66 ntBASIC8.36□□□□□ -1.07
SNX18Q96RF0 AC138894.4-201ENST00000616703 256 ntBASIC8.36□□□□□ -1.07
SNX18Q96RF0 MIR6877-201ENST00000620452 64 ntBASIC8.36□□□□□ -1.07
SNX18Q96RF0 AC079336.6-201ENST00000624836 613 ntBASIC8.36□□□□□ -1.07
SNX18Q96RF0 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 AC099654.11-201ENST00000638857 294 ntBASIC8.36□□□□□ -1.07
SNX18Q96RF0 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 ZNF468-201ENST00000243639 4027 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SNX18Q96RF0 SP2-AS1-201ENST00000411573 1738 ntTSL 2 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 BTN3A2-204ENST00000396948 1494 ntAPPRIS P3 TSL 5 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNX18Q96RF0 TRIT1-203ENST00000441669 1851 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SNX18Q96RF0 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SNX18Q96RF0 DARS2-201ENST00000361951 3506 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNX18Q96RF0 STAT1-204ENST00000409465 3097 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 LINC01182-202ENST00000510907 2228 ntTSL 2 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 FO393409.1-201ENST00000399325 1372 ntBASIC8.35□□□□□ -1.07
SNX18Q96RF0 HSP90AB1-204ENST00000620073 2644 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 AC108704.2-201ENST00000623017 1565 ntBASIC8.35□□□□□ -1.07
SNX18Q96RF0 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 GP2-201ENST00000302555 3406 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 AKAP13-217ENST00000560302 3765 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 ABRAXAS1-208ENST00000515303 1732 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 MKL2-207ENST00000573051 1938 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 BRPF1-206ENST00000457855 4308 ntAPPRIS P3 TSL 2 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 ZNF138-202ENST00000359735 2679 ntTSL 4 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 AL132796.2-201ENST00000554025 1851 ntTSL 5 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 ATP5O-201ENST00000290299 932 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 OR13D1-201ENST00000318763 1107 ntBASIC8.35□□□□□ -1.07
SNX18Q96RF0 PMS2P6-201ENST00000333674 710 ntBASIC8.35□□□□□ -1.07
SNX18Q96RF0 AC019077.1-201ENST00000356499 397 ntTSL 3 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 RN7SKP217-201ENST00000364640 340 ntBASIC8.35□□□□□ -1.07
SNX18Q96RF0 SUN5-203ENST00000375523 1153 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 AC211476.3-201ENST00000380410 715 ntBASIC8.35□□□□□ -1.07
SNX18Q96RF0 IGHV1-58-201ENST00000390628 414 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 AL035696.2-201ENST00000407941 709 ntBASIC8.35□□□□□ -1.07
SNX18Q96RF0 GYG1P3-201ENST00000449769 994 ntBASIC8.35□□□□□ -1.07
SNX18Q96RF0 LINC00307-201ENST00000451410 424 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 RBMX2P1-201ENST00000454795 836 ntBASIC8.35□□□□□ -1.07
SNX18Q96RF0 SETP4-201ENST00000455717 868 ntBASIC8.35□□□□□ -1.07
SNX18Q96RF0 AL121721.1-201ENST00000460400 568 ntTSL 4 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 TMED10P2-201ENST00000474255 612 ntBASIC8.35□□□□□ -1.07
SNX18Q96RF0 RPL7AP9-201ENST00000484287 800 ntBASIC8.35□□□□□ -1.07
SNX18Q96RF0 OR7E43P-201ENST00000503910 920 ntBASIC8.35□□□□□ -1.07
SNX18Q96RF0 LINC00491-201ENST00000505527 722 ntTSL 3 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 LINC02499-203ENST00000508147 455 ntTSL 3 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 GOT1L1-202ENST00000518826 497 ntTSL 2 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 AC011632.1-201ENST00000523860 773 ntTSL 3 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 ST3GAL3-234ENST00000531993 786 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 AL136418.1-201ENST00000551799 975 ntTSL 3 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 AL132639.1-201ENST00000553698 475 ntBASIC8.35□□□□□ -1.07
SNX18Q96RF0 AC087477.5-201ENST00000558246 562 ntTSL 3 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 AC092139.1-201ENST00000567149 497 ntBASIC8.35□□□□□ -1.07
SNX18Q96RF0 MED31-203ENST00000575197 593 ntTSL 2 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 CLEC4M-206ENST00000595496 792 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 AL035422.2-201ENST00000603059 565 ntBASIC8.35□□□□□ -1.07
SNX18Q96RF0 SMARCE1P7-201ENST00000605515 485 ntBASIC8.35□□□□□ -1.07
SNX18Q96RF0 AL080250.1-202ENST00000607221 915 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 ARID1A-209ENST00000615191 3804 ntTSL 5 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 LINC01697-206ENST00000616647 544 ntTSL 5 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 LINC00710-218ENST00000634614 1166 ntTSL 5 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 ZNF333-201ENST00000292530 4672 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 SLC9A6-207ENST00000636092 4697 ntTSL 5 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 BECN1-202ENST00000438274 1569 ntTSL 2 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 ACAP2-215ENST00000618471 3207 ntTSL 5 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 RRN3-201ENST00000198767 3762 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 PPP2R2A-202ENST00000380737 3940 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 CASK-208ENST00000442742 2800 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SNX18Q96RF0 LINC00939-202ENST00000507313 2819 ntTSL 2 BASIC8.35□□□□□ -1.07
SNX18Q96RF0 AC008937.3-201ENST00000606813 1700 ntBASIC8.34□□□□□ -1.07
SNX18Q96RF0 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms