Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ZNF608-203ENST00000504926 4726 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 MAPK10-205ENST00000395160 2448 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 IL2RB-201ENST00000216223 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 HELQ-204ENST00000510985 3315 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 FAM13C-217ENST00000618804 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 NBPF19-203ENST00000578189 5034 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 LINC00210-201ENST00000431637 1584 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 FXR1-202ENST00000357559 8711 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 LMLN-201ENST00000330198 7043 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 NTRK3-221ENST00000629765 2714 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 LINC02009-201ENST00000635852 2951 ntTSL 3 BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 BRD7P2-201ENST00000466133 1944 ntBASIC9.59□□□□□ -0.87
LMO3Q8TAP4 TTTY8B-201ENST00000328819 531 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 TTTY8-201ENST00000329684 531 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 ZNF483-202ENST00000355824 1239 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 GEMIN6-203ENST00000409566 834 ntTSL 2 BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 HCG18-234ENST00000413358 916 ntTSL 3 BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 KRT18P12-201ENST00000425245 1273 ntBASIC9.59□□□□□ -0.87
LMO3Q8TAP4 SNRPCP1-201ENST00000433292 458 ntBASIC9.59□□□□□ -0.87
LMO3Q8TAP4 AL031289.1-201ENST00000440100 471 ntTSL 3 BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 AC008591.1-202ENST00000515569 462 ntTSL 2 BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 AC011632.1-203ENST00000522914 454 ntTSL 3 BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 AC156455.1-202ENST00000540968 587 ntTSL 4 BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 AC079363.1-201ENST00000551366 1125 ntBASIC9.59□□□□□ -0.87
LMO3Q8TAP4 AL591767.2-201ENST00000554984 173 ntBASIC9.59□□□□□ -0.87
LMO3Q8TAP4 AC007218.1-201ENST00000561538 660 ntTSL 3 BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 AC023983.1-201ENST00000579347 567 ntTSL 5 BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 AC010776.1-201ENST00000588298 542 ntTSL 4 BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 AC007785.3-201ENST00000595955 544 ntTSL 5 BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 AL031281.2-201ENST00000606754 748 ntBASIC9.59□□□□□ -0.87
LMO3Q8TAP4 AC073657.1-201ENST00000607504 316 ntTSL 3 BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 AC002470.1-201ENST00000610278 395 ntBASIC9.59□□□□□ -0.87
LMO3Q8TAP4 YARS-210ENST00000616261 1167 ntTSL 5 BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 ARMC8-215ENST00000471453 2910 ntTSL 2 BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 DOCK2-217ENST00000540750 1753 ntTSL 5 BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 ZEB2-201ENST00000303660 3913 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 PABPC4L-201ENST00000421491 4944 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 SNCA-201ENST00000336904 3041 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 NRP1-212ENST00000432372 4137 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 ABL2-206ENST00000504405 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 TEP1-209ENST00000556935 7643 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 TCAF1-201ENST00000355951 3343 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 ADGRF4-202ENST00000327753 3074 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 AMER1-201ENST00000330258 8443 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LMO3Q8TAP4 XRCC6P1-201ENST00000420392 1805 ntBASIC9.59□□□□□ -0.88
LMO3Q8TAP4 TMPRSS11B-201ENST00000332644 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
LMO3Q8TAP4 AL449403.2-201ENST00000624497 2662 ntTSL 2 BASIC9.59□□□□□ -0.88
LMO3Q8TAP4 LRMP-205ENST00000548766 2193 ntAPPRIS P2 TSL 2 BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 SLITRK3-202ENST00000475390 4555 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 AC128688.2-201ENST00000563632 1937 ntBASIC9.58□□□□□ -0.88
LMO3Q8TAP4 AC026124.1-201ENST00000545709 3457 ntTSL 5 BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 SCMH1-205ENST00000372595 3231 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 AC009102.1-201ENST00000564074 1777 ntTSL 2 BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 LRRC49-203ENST00000443425 3085 ntTSL 2 BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 ACTR2-201ENST00000260641 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 CCDC113-201ENST00000219299 5272 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 ZEB2-215ENST00000465070 2949 ntTSL 2 BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 UTY-201ENST00000329134 4325 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 ZSCAN32-201ENST00000304926 3027 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 LRRC4C-204ENST00000530763 2669 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 OR10J5-201ENST00000334857 930 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 LINC00970-201ENST00000366408 1129 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 HCG24-202ENST00000414398 717 ntTSL 3 BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 AC002064.1-201ENST00000445784 733 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 AC012307.1-201ENST00000449242 197 ntTSL 3 BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 HNRNPA3P2-201ENST00000451198 662 ntBASIC9.58□□□□□ -0.88
LMO3Q8TAP4 RN7SL724P-201ENST00000461895 271 ntBASIC9.58□□□□□ -0.88
LMO3Q8TAP4 RN7SL7P-201ENST00000467823 298 ntBASIC9.58□□□□□ -0.88
LMO3Q8TAP4 PTPN20-215ENST00000505814 1244 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 NREP-219ENST00000509979 771 ntTSL 4 BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 TXNRD1-208ENST00000525566 3836 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 AC136443.2-201ENST00000528546 258 ntBASIC9.58□□□□□ -0.88
LMO3Q8TAP4 AL133371.3-201ENST00000556197 549 ntTSL 4 BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 AC136619.1-201ENST00000564015 258 ntBASIC9.58□□□□□ -0.88
LMO3Q8TAP4 AC009120.2-203ENST00000565313 539 ntTSL 3 BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 SHBG-209ENST00000572182 479 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 LINC01892-202ENST00000583985 540 ntTSL 4 BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 C1orf186-209ENST00000603488 727 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 AC097376.2-203ENST00000608663 431 ntTSL 3 BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 Metazoa_SRP.45-201ENST00000620896 299 ntBASIC9.58□□□□□ -0.88
LMO3Q8TAP4 AL109920.1-201ENST00000632749 415 ntTSL 2 BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 AL450332.1-203ENST00000638742 1268 ntTSL 5 BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 FHAD1-206ENST00000375998 4355 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 SP2-AS1-201ENST00000411573 1738 ntTSL 2 BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 NUP93-210ENST00000564887 2875 ntTSL 2 BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 ATF3-206ENST00000366987 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 TCF7L2-204ENST00000352065 1553 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 PPP1R2-206ENST00000618156 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 RNF41-201ENST00000345093 5596 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LMO3Q8TAP4 IL24-204ENST00000391929 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 AC009403.2-202ENST00000636307 3956 ntTSL 5 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 NAALAD2-210ENST00000534061 3600 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 AC090061.1-202ENST00000502102 1449 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 AC114980.1-201ENST00000505668 3157 ntBASIC9.57□□□□□ -0.88
LMO3Q8TAP4 AMD1-202ENST00000368877 1605 ntTSL 2 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 SIRT5-201ENST00000359782 3797 ntTSL 2 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 AC118282.4-201ENST00000623090 1712 ntBASIC9.57□□□□□ -0.88
LMO3Q8TAP4 SNCA-206ENST00000420646 3127 ntTSL 2 BASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms