Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 BTN2A3P-204ENST00000466808 2559 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 L3MBTL3-203ENST00000368139 4148 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 VNN3-212ENST00000519686 1377 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 HCG18-242ENST00000602319 3342 ntBASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 NOL11-201ENST00000253247 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 ECM2-201ENST00000344604 3253 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 NPIPA7-202ENST00000530217 1331 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 AC124804.1-202ENST00000583712 4315 ntTSL 5 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 TFDP3-201ENST00000310125 1680 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 TRY2P-202ENST00000616556 2039 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 AC239799.2-201ENST00000622359 2002 ntBASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 DNM1L-211ENST00000547312 2393 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 IL37-201ENST00000263326 772 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 S100A8-201ENST00000368732 495 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 RPL35P3-201ENST00000403133 371 ntBASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 AL590617.1-201ENST00000405630 748 ntBASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 LENG8-AS1-202ENST00000429922 871 ntTSL 4 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 GAPDHP68-201ENST00000434621 1008 ntBASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 OR2W6P-201ENST00000439689 939 ntBASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 BX293535.1-201ENST00000443579 283 ntTSL 3 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 AP000688.3-201ENST00000445464 348 ntTSL 3 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 AC073583.1-201ENST00000447553 400 ntBASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 POLR3KP1-201ENST00000449146 342 ntBASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 AL451124.1-201ENST00000478520 1026 ntBASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 RPL12P42-201ENST00000481802 499 ntBASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 AC017013.1-201ENST00000506459 799 ntBASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 MRPS18C-205ENST00000507349 350 ntTSL 3 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 ENPP7P1-201ENST00000509557 999 ntBASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 AC010343.3-201ENST00000512323 446 ntTSL 3 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 AC023403.1-202ENST00000521139 759 ntTSL 3 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 MBP-228ENST00000527041 582 ntTSL 5 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 AP003170.1-201ENST00000536944 1030 ntBASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 AC087798.1-201ENST00000547882 534 ntTSL 5 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 NR2F2-AS1-207ENST00000560170 547 ntTSL 4 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 ZNF222-203ENST00000587846 537 ntTSL 4 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 ZNF415-223ENST00000601215 561 ntTSL 4 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 EDRF1-AS1-207ENST00000610534 706 ntTSL 5 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 AC007450.2-201ENST00000614160 290 ntBASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 AC018554.3-201ENST00000614215 1026 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 AL354751.3-201ENST00000618526 1027 ntBASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 PRB4-204ENST00000621732 709 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 AC022784.8-201ENST00000623764 559 ntBASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 LINC02211-202ENST00000641091 839 ntBASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 RSPH4A-203ENST00000368581 2704 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 NUMA1-201ENST00000351960 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 AL008721.2-201ENST00000609475 3754 ntBASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 BNIPL-201ENST00000295294 2336 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 NDUFS1-202ENST00000423725 2631 ntTSL 2 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 HNRNPC-223ENST00000556142 1599 ntTSL 5 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 BCDIN3D-201ENST00000333924 3253 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 MLF1-202ENST00000359117 2222 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 CACNB4-231ENST00000636721 1542 ntTSL 5 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 OR7E122P-202ENST00000641144 6171 ntBASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 NR3C2-208ENST00000512865 3822 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 TNFAIP3-210ENST00000620204 3817 ntTSL 5 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 FCAR-203ENST00000355524 1483 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 OR3A4P-202ENST00000624752 1461 ntBASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 ANKRD55-203ENST00000504958 2139 ntTSL 5 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 TRPM3-207ENST00000377101 2075 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 LINC00243-201ENST00000399196 2052 ntTSL 2 BASIC8.38□□□□□ -1.07
NPIPA3F8WFD2 BDNF-216ENST00000532997 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 FBXW7-204ENST00000393956 1735 ntTSL 2 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 AC084876.2-201ENST00000624844 1709 ntBASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 C17orf80-206ENST00000577615 2049 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 TBCA-201ENST00000306388 2301 ntTSL 2 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 LARP1B-210ENST00000512292 3105 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 SRP19-204ENST00000505459 2841 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 ZNF317-202ENST00000360385 3955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 THRB-AS1-205ENST00000609230 1318 ntTSL 5 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 KBTBD4-201ENST00000395288 2460 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 AC011893.1-201ENST00000437007 1862 ntTSL 2 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 TRERF1-201ENST00000340840 4174 ntTSL 5 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 EGFLAM-201ENST00000322350 4411 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 SLAMF7-207ENST00000458602 2449 ntTSL 2 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 XPNPEP2-202ENST00000371106 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 RNVU1-7-201ENST00000383858 164 ntBASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 RNASE4-201ENST00000397995 853 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 SNORD88A-201ENST00000408314 91 ntBASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 ATP5G3-203ENST00000409194 795 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 LINC01687-202ENST00000419467 465 ntTSL 3 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 LINC02028-201ENST00000420947 528 ntTSL 3 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 AC112907.1-201ENST00000434957 540 ntTSL 4 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 RFTN1P1-201ENST00000442584 1033 ntTSL 5 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 ADAMTS9-AS2-204ENST00000485174 573 ntTSL 4 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 AC093835.1-201ENST00000508072 568 ntTSL 4 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 AC022092.1-201ENST00000510230 504 ntTSL 3 BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 SRD5A3-AS1-202ENST00000510637 926 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 RNU4ATAC12P-201ENST00000516460 113 ntBASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 IGHVIII-51-1-201ENST00000519403 302 ntBASIC8.37□□□□□ -1.07
NPIPA3F8WFD2 SLA-223ENST00000524345 1003 ntTSL 2 BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms