Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAI2Q9Y5P3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAI2Q9Y5P3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAI2Q9Y5P3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAI2Q9Y5P3 AC006128.1-201ENST00000624704 1661 ntBASIC20.75■□□□□ 0.91
RAI2Q9Y5P3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAI2Q9Y5P3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAI2Q9Y5P3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.75■□□□□ 0.91
RAI2Q9Y5P3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAI2Q9Y5P3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAI2Q9Y5P3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAI2Q9Y5P3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.75■□□□□ 0.91
RAI2Q9Y5P3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.75■□□□□ 0.91
RAI2Q9Y5P3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAI2Q9Y5P3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.74■□□□□ 0.91
RAI2Q9Y5P3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAI2Q9Y5P3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RAI2Q9Y5P3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.74■□□□□ 0.91
RAI2Q9Y5P3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAI2Q9Y5P3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RAI2Q9Y5P3 TSPY6P-201ENST00000448518 926 ntBASIC20.74■□□□□ 0.91
RAI2Q9Y5P3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.74■□□□□ 0.91
RAI2Q9Y5P3 AC133552.2-202ENST00000575694 574 ntBASIC20.74■□□□□ 0.91
RAI2Q9Y5P3 AC008687.6-201ENST00000596318 630 ntBASIC20.74■□□□□ 0.91
RAI2Q9Y5P3 AL121832.2-201ENST00000610979 668 ntBASIC20.74■□□□□ 0.91
RAI2Q9Y5P3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.74■□□□□ 0.91
RAI2Q9Y5P3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
RAI2Q9Y5P3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.74■□□□□ 0.91
RAI2Q9Y5P3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAI2Q9Y5P3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAI2Q9Y5P3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAI2Q9Y5P3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAI2Q9Y5P3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAI2Q9Y5P3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.73■□□□□ 0.91
RAI2Q9Y5P3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.73■□□□□ 0.91
RAI2Q9Y5P3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAI2Q9Y5P3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAI2Q9Y5P3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.73■□□□□ 0.91
RAI2Q9Y5P3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAI2Q9Y5P3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAI2Q9Y5P3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAI2Q9Y5P3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAI2Q9Y5P3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAI2Q9Y5P3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAI2Q9Y5P3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.72■□□□□ 0.91
RAI2Q9Y5P3 AC027702.1-201ENST00000563810 1770 ntBASIC20.72■□□□□ 0.91
RAI2Q9Y5P3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAI2Q9Y5P3 AC093787.1-201ENST00000450396 207 ntBASIC20.72■□□□□ 0.91
RAI2Q9Y5P3 AF201337.1-201ENST00000520239 748 ntBASIC20.72■□□□□ 0.91
RAI2Q9Y5P3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.72■□□□□ 0.91
RAI2Q9Y5P3 AL138781.1-201ENST00000566567 1274 ntBASIC20.72■□□□□ 0.91
RAI2Q9Y5P3 AC105036.2-201ENST00000569468 176 ntBASIC20.72■□□□□ 0.91
RAI2Q9Y5P3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.72■□□□□ 0.91
RAI2Q9Y5P3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAI2Q9Y5P3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAI2Q9Y5P3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.72■□□□□ 0.91
RAI2Q9Y5P3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RAI2Q9Y5P3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.71■□□□□ 0.91
RAI2Q9Y5P3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.71■□□□□ 0.91
RAI2Q9Y5P3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAI2Q9Y5P3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAI2Q9Y5P3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAI2Q9Y5P3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAI2Q9Y5P3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.71■□□□□ 0.91
RAI2Q9Y5P3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAI2Q9Y5P3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAI2Q9Y5P3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.71■□□□□ 0.91
RAI2Q9Y5P3 AL512625.2-201ENST00000417533 625 ntBASIC20.71■□□□□ 0.91
RAI2Q9Y5P3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAI2Q9Y5P3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.71■□□□□ 0.91
RAI2Q9Y5P3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAI2Q9Y5P3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.71■□□□□ 0.91
RAI2Q9Y5P3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
RAI2Q9Y5P3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RAI2Q9Y5P3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RAI2Q9Y5P3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAI2Q9Y5P3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RAI2Q9Y5P3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RAI2Q9Y5P3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.7■□□□□ 0.91
RAI2Q9Y5P3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAI2Q9Y5P3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.7■□□□□ 0.9
RAI2Q9Y5P3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAI2Q9Y5P3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.7■□□□□ 0.9
RAI2Q9Y5P3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAI2Q9Y5P3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RAI2Q9Y5P3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAI2Q9Y5P3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAI2Q9Y5P3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAI2Q9Y5P3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.7■□□□□ 0.9
RAI2Q9Y5P3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.7■□□□□ 0.9
RAI2Q9Y5P3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.7■□□□□ 0.9
RAI2Q9Y5P3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
RAI2Q9Y5P3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.7■□□□□ 0.9
RAI2Q9Y5P3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAI2Q9Y5P3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.7■□□□□ 0.9
RAI2Q9Y5P3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAI2Q9Y5P3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAI2Q9Y5P3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAI2Q9Y5P3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAI2Q9Y5P3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms