Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 KRT18P68-201ENST00000392293 1000 ntBASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 AL355802.2-201ENST00000402069 882 ntBASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 AC073210.2-201ENST00000430369 194 ntBASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN16Q9Y5I7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN16Q9Y5I7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CLDN16Q9Y5I7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN16Q9Y5I7 AL121603.2-201ENST00000557373 2117 ntBASIC19.15■□□□□ 0.66
CLDN16Q9Y5I7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN16Q9Y5I7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN16Q9Y5I7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN16Q9Y5I7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLDN16Q9Y5I7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CLDN16Q9Y5I7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLDN16Q9Y5I7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN16Q9Y5I7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.15■□□□□ 0.66
CLDN16Q9Y5I7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN16Q9Y5I7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN16Q9Y5I7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN16Q9Y5I7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN16Q9Y5I7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
CLDN16Q9Y5I7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.14■□□□□ 0.66
CLDN16Q9Y5I7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN16Q9Y5I7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN16Q9Y5I7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN16Q9Y5I7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN16Q9Y5I7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN16Q9Y5I7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CLDN16Q9Y5I7 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.14■□□□□ 0.65
CLDN16Q9Y5I7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN16Q9Y5I7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.14■□□□□ 0.65
CLDN16Q9Y5I7 MYC-209ENST00000641252 345 ntBASIC19.14■□□□□ 0.65
CLDN16Q9Y5I7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN16Q9Y5I7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN16Q9Y5I7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN16Q9Y5I7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN16Q9Y5I7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN16Q9Y5I7 AC069152.1-201ENST00000438030 544 ntBASIC19.13■□□□□ 0.65
CLDN16Q9Y5I7 AC105020.6-201ENST00000621523 1217 ntBASIC19.13■□□□□ 0.65
CLDN16Q9Y5I7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN16Q9Y5I7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
CLDN16Q9Y5I7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN16Q9Y5I7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN16Q9Y5I7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN16Q9Y5I7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN16Q9Y5I7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN16Q9Y5I7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.13■□□□□ 0.65
CLDN16Q9Y5I7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN16Q9Y5I7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CLDN16Q9Y5I7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN16Q9Y5I7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN16Q9Y5I7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN16Q9Y5I7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN16Q9Y5I7 KRT8P36-201ENST00000489121 1440 ntBASIC19.11■□□□□ 0.65
CLDN16Q9Y5I7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN16Q9Y5I7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN16Q9Y5I7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN16Q9Y5I7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.11■□□□□ 0.65
CLDN16Q9Y5I7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN16Q9Y5I7 MIR4758-201ENST00000577688 71 ntBASIC19.11■□□□□ 0.65
CLDN16Q9Y5I7 AL356652.1-201ENST00000615962 565 ntBASIC19.11■□□□□ 0.65
CLDN16Q9Y5I7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN16Q9Y5I7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms