Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PCDHGB3Q9Y5G1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PCDHGB3Q9Y5G1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGB3Q9Y5G1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHGB3Q9Y5G1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PCDHGB3Q9Y5G1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGB3Q9Y5G1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PCDHGB3Q9Y5G1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB3Q9Y5G1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB3Q9Y5G1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCDHGB3Q9Y5G1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB3Q9Y5G1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PCDHGB3Q9Y5G1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB3Q9Y5G1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PCDHGB3Q9Y5G1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PCDHGB3Q9Y5G1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDHGB3Q9Y5G1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGB3Q9Y5G1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.41■□□□□ 0.7
PCDHGB3Q9Y5G1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.41■□□□□ 0.7
PCDHGB3Q9Y5G1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB3Q9Y5G1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB3Q9Y5G1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB3Q9Y5G1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB3Q9Y5G1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGB3Q9Y5G1 PLK5-205ENST00000642079 1969 ntBASIC19.41■□□□□ 0.7
PCDHGB3Q9Y5G1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB3Q9Y5G1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB3Q9Y5G1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PCDHGB3Q9Y5G1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB3Q9Y5G1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB3Q9Y5G1 AC004911.1-201ENST00000416316 871 ntBASIC19.4■□□□□ 0.7
PCDHGB3Q9Y5G1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGB3Q9Y5G1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB3Q9Y5G1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB3Q9Y5G1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGB3Q9Y5G1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB3Q9Y5G1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGB3Q9Y5G1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
PCDHGB3Q9Y5G1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PCDHGB3Q9Y5G1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGB3Q9Y5G1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PCDHGB3Q9Y5G1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGB3Q9Y5G1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PCDHGB3Q9Y5G1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHGB3Q9Y5G1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHGB3Q9Y5G1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.39■□□□□ 0.7
PCDHGB3Q9Y5G1 AC073314.1-201ENST00000568729 2216 ntBASIC19.39■□□□□ 0.69
PCDHGB3Q9Y5G1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB3Q9Y5G1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB3Q9Y5G1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDHGB3Q9Y5G1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGB3Q9Y5G1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGB3Q9Y5G1 KRT18P11-201ENST00000435214 1283 ntBASIC19.39■□□□□ 0.69
PCDHGB3Q9Y5G1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDHGB3Q9Y5G1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGB3Q9Y5G1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB3Q9Y5G1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB3Q9Y5G1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB3Q9Y5G1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
PCDHGB3Q9Y5G1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB3Q9Y5G1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB3Q9Y5G1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB3Q9Y5G1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGB3Q9Y5G1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGB3Q9Y5G1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGB3Q9Y5G1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHGB3Q9Y5G1 AC061975.6-201ENST00000579045 1553 ntBASIC19.37■□□□□ 0.69
PCDHGB3Q9Y5G1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
PCDHGB3Q9Y5G1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PCDHGB3Q9Y5G1 KRT16P2-201ENST00000414673 1423 ntBASIC19.37■□□□□ 0.69
PCDHGB3Q9Y5G1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PCDHGB3Q9Y5G1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGB3Q9Y5G1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGB3Q9Y5G1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGB3Q9Y5G1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHGB3Q9Y5G1 AC016769.1-201ENST00000409132 1010 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms