Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TPRKBQ9Y3C4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TPRKBQ9Y3C4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TPRKBQ9Y3C4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TPRKBQ9Y3C4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
TPRKBQ9Y3C4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.71■□□□□ 0.59
TPRKBQ9Y3C4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TPRKBQ9Y3C4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPRKBQ9Y3C4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPRKBQ9Y3C4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.71■□□□□ 0.59
TPRKBQ9Y3C4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.71■□□□□ 0.58
TPRKBQ9Y3C4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TPRKBQ9Y3C4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TPRKBQ9Y3C4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPRKBQ9Y3C4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPRKBQ9Y3C4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TPRKBQ9Y3C4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TPRKBQ9Y3C4 KRT8P33-201ENST00000508125 1423 ntBASIC18.7■□□□□ 0.58
TPRKBQ9Y3C4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TPRKBQ9Y3C4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
TPRKBQ9Y3C4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TPRKBQ9Y3C4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.7■□□□□ 0.58
TPRKBQ9Y3C4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TPRKBQ9Y3C4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
TPRKBQ9Y3C4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TPRKBQ9Y3C4 AC092720.2-201ENST00000602388 1665 ntBASIC18.69■□□□□ 0.58
TPRKBQ9Y3C4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPRKBQ9Y3C4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPRKBQ9Y3C4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TPRKBQ9Y3C4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPRKBQ9Y3C4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPRKBQ9Y3C4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
TPRKBQ9Y3C4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.69■□□□□ 0.58
TPRKBQ9Y3C4 AC006455.2-201ENST00000429931 906 ntBASIC18.69■□□□□ 0.58
TPRKBQ9Y3C4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.69■□□□□ 0.58
TPRKBQ9Y3C4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.69■□□□□ 0.58
TPRKBQ9Y3C4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPRKBQ9Y3C4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.69■□□□□ 0.58
TPRKBQ9Y3C4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPRKBQ9Y3C4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPRKBQ9Y3C4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TPRKBQ9Y3C4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TPRKBQ9Y3C4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPRKBQ9Y3C4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPRKBQ9Y3C4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
TPRKBQ9Y3C4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.68■□□□□ 0.58
TPRKBQ9Y3C4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TPRKBQ9Y3C4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.68■□□□□ 0.58
TPRKBQ9Y3C4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TPRKBQ9Y3C4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.68■□□□□ 0.58
TPRKBQ9Y3C4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPRKBQ9Y3C4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPRKBQ9Y3C4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPRKBQ9Y3C4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPRKBQ9Y3C4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 AC004408.2-201ENST00000623613 2777 ntBASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 AL158211.5-201ENST00000623583 2518 ntBASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TPRKBQ9Y3C4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPRKBQ9Y3C4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TPRKBQ9Y3C4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TPRKBQ9Y3C4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPRKBQ9Y3C4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.66■□□□□ 0.58
TPRKBQ9Y3C4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPRKBQ9Y3C4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TPRKBQ9Y3C4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPRKBQ9Y3C4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TPRKBQ9Y3C4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPRKBQ9Y3C4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPRKBQ9Y3C4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPRKBQ9Y3C4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPRKBQ9Y3C4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPRKBQ9Y3C4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TPRKBQ9Y3C4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPRKBQ9Y3C4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TPRKBQ9Y3C4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPRKBQ9Y3C4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms