Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
SHANK2Q9UPX8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
SHANK2Q9UPX8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
SHANK2Q9UPX8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
SHANK2Q9UPX8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
SHANK2Q9UPX8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC30.77■■■□□ 2.52
SHANK2Q9UPX8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC30.77■■■□□ 2.52
SHANK2Q9UPX8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC30.77■■■□□ 2.52
SHANK2Q9UPX8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
SHANK2Q9UPX8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
SHANK2Q9UPX8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
SHANK2Q9UPX8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
SHANK2Q9UPX8 AC211429.1-201ENST00000415277 523 ntBASIC30.76■■■□□ 2.52
SHANK2Q9UPX8 AC012618.2-201ENST00000428058 849 ntBASIC30.76■■■□□ 2.52
SHANK2Q9UPX8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
SHANK2Q9UPX8 AC133681.1-201ENST00000465482 601 ntBASIC30.76■■■□□ 2.52
SHANK2Q9UPX8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC30.76■■■□□ 2.52
SHANK2Q9UPX8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC30.76■■■□□ 2.52
SHANK2Q9UPX8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.52
SHANK2Q9UPX8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC30.76■■■□□ 2.52
SHANK2Q9UPX8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC30.76■■■□□ 2.51
SHANK2Q9UPX8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
SHANK2Q9UPX8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
SHANK2Q9UPX8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
SHANK2Q9UPX8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC30.76■■■□□ 2.51
SHANK2Q9UPX8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC30.76■■■□□ 2.51
SHANK2Q9UPX8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
SHANK2Q9UPX8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
SHANK2Q9UPX8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
SHANK2Q9UPX8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC30.75■■■□□ 2.51
SHANK2Q9UPX8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
SHANK2Q9UPX8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SHANK2Q9UPX8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SHANK2Q9UPX8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC30.75■■■□□ 2.51
SHANK2Q9UPX8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SHANK2Q9UPX8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SHANK2Q9UPX8 MIR718-201ENST00000390190 70 ntBASIC30.75■■■□□ 2.51
SHANK2Q9UPX8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
SHANK2Q9UPX8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC30.75■■■□□ 2.51
SHANK2Q9UPX8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC30.75■■■□□ 2.51
SHANK2Q9UPX8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC30.75■■■□□ 2.51
SHANK2Q9UPX8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SHANK2Q9UPX8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SHANK2Q9UPX8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SHANK2Q9UPX8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
SHANK2Q9UPX8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
SHANK2Q9UPX8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SHANK2Q9UPX8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC30.74■■■□□ 2.51
SHANK2Q9UPX8 AC124016.1-201ENST00000609552 612 ntBASIC30.74■■■□□ 2.51
SHANK2Q9UPX8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
SHANK2Q9UPX8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
SHANK2Q9UPX8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SHANK2Q9UPX8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
SHANK2Q9UPX8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SHANK2Q9UPX8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SHANK2Q9UPX8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
SHANK2Q9UPX8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SHANK2Q9UPX8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SHANK2Q9UPX8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC30.73■■■□□ 2.51
SHANK2Q9UPX8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC30.73■■■□□ 2.51
SHANK2Q9UPX8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SHANK2Q9UPX8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SHANK2Q9UPX8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
SHANK2Q9UPX8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC30.73■■■□□ 2.51
SHANK2Q9UPX8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
SHANK2Q9UPX8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
SHANK2Q9UPX8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC30.73■■■□□ 2.51
SHANK2Q9UPX8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
SHANK2Q9UPX8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
SHANK2Q9UPX8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
SHANK2Q9UPX8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC30.73■■■□□ 2.51
SHANK2Q9UPX8 AC244015.2-201ENST00000616358 1861 ntBASIC30.72■■■□□ 2.51
SHANK2Q9UPX8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SHANK2Q9UPX8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SHANK2Q9UPX8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
SHANK2Q9UPX8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC30.72■■■□□ 2.51
SHANK2Q9UPX8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
SHANK2Q9UPX8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
SHANK2Q9UPX8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SHANK2Q9UPX8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
SHANK2Q9UPX8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC30.72■■■□□ 2.51
SHANK2Q9UPX8 ABHD17AP6-201ENST00000458502 1044 ntBASIC30.72■■■□□ 2.51
SHANK2Q9UPX8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
SHANK2Q9UPX8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC30.72■■■□□ 2.51
SHANK2Q9UPX8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
SHANK2Q9UPX8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC30.72■■■□□ 2.51
SHANK2Q9UPX8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC30.72■■■□□ 2.51
SHANK2Q9UPX8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SHANK2Q9UPX8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SHANK2Q9UPX8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC30.71■■■□□ 2.51
SHANK2Q9UPX8 RER1-204ENST00000378518 522 ntTSL 3 BASIC30.71■■■□□ 2.51
SHANK2Q9UPX8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC30.71■■■□□ 2.51
SHANK2Q9UPX8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SHANK2Q9UPX8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
SHANK2Q9UPX8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC30.71■■■□□ 2.51
SHANK2Q9UPX8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC30.71■■■□□ 2.51
SHANK2Q9UPX8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC30.7■■■□□ 2.51
SHANK2Q9UPX8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC30.7■■■□□ 2.51
SHANK2Q9UPX8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
SHANK2Q9UPX8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC30.7■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms