Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC110285.6-201ENST00000617652 491 ntBASIC18.26■□□□□ 0.51
COPS3Q9UNS2 AL355001.2-201ENST00000620617 1191 ntBASIC18.26■□□□□ 0.51
COPS3Q9UNS2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPS3Q9UNS2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
COPS3Q9UNS2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COPS3Q9UNS2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
COPS3Q9UNS2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COPS3Q9UNS2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COPS3Q9UNS2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COPS3Q9UNS2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.25■□□□□ 0.51
COPS3Q9UNS2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COPS3Q9UNS2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COPS3Q9UNS2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.25■□□□□ 0.51
COPS3Q9UNS2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COPS3Q9UNS2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COPS3Q9UNS2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COPS3Q9UNS2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.25■□□□□ 0.51
COPS3Q9UNS2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COPS3Q9UNS2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COPS3Q9UNS2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COPS3Q9UNS2 AC099778.1-201ENST00000568593 1911 ntBASIC18.25■□□□□ 0.51
COPS3Q9UNS2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COPS3Q9UNS2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.25■□□□□ 0.51
COPS3Q9UNS2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
COPS3Q9UNS2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COPS3Q9UNS2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COPS3Q9UNS2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COPS3Q9UNS2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COPS3Q9UNS2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COPS3Q9UNS2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
COPS3Q9UNS2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.24■□□□□ 0.51
COPS3Q9UNS2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COPS3Q9UNS2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COPS3Q9UNS2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
COPS3Q9UNS2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COPS3Q9UNS2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.24■□□□□ 0.51
COPS3Q9UNS2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COPS3Q9UNS2 AC091305.1-201ENST00000479476 895 ntBASIC18.24■□□□□ 0.51
COPS3Q9UNS2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.24■□□□□ 0.51
COPS3Q9UNS2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
COPS3Q9UNS2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
COPS3Q9UNS2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.24■□□□□ 0.51
COPS3Q9UNS2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COPS3Q9UNS2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.24■□□□□ 0.51
COPS3Q9UNS2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.24■□□□□ 0.51
COPS3Q9UNS2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COPS3Q9UNS2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 AL136967.2-201ENST00000623968 743 ntBASIC18.23■□□□□ 0.51
COPS3Q9UNS2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COPS3Q9UNS2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.22■□□□□ 0.51
COPS3Q9UNS2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms