Protein–RNA interactions for Protein: Q9UMQ6

CAPN11, Calpain-11, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11Q9UMQ6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.19■■□□□ 1.14
CAPN11Q9UMQ6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
CAPN11Q9UMQ6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CAPN11Q9UMQ6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CAPN11Q9UMQ6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CAPN11Q9UMQ6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CAPN11Q9UMQ6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.18■■□□□ 1.14
CAPN11Q9UMQ6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
CAPN11Q9UMQ6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CAPN11Q9UMQ6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CAPN11Q9UMQ6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.18■■□□□ 1.14
CAPN11Q9UMQ6 AC245052.3-201ENST00000450182 901 ntBASIC22.18■■□□□ 1.14
CAPN11Q9UMQ6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CAPN11Q9UMQ6 MIR2861-201ENST00000636310 90 ntBASIC22.18■■□□□ 1.14
CAPN11Q9UMQ6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CAPN11Q9UMQ6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.18■■□□□ 1.14
CAPN11Q9UMQ6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.18■■□□□ 1.14
CAPN11Q9UMQ6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CAPN11Q9UMQ6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CAPN11Q9UMQ6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CAPN11Q9UMQ6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CAPN11Q9UMQ6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CAPN11Q9UMQ6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
CAPN11Q9UMQ6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC22.17■■□□□ 1.14
CAPN11Q9UMQ6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
CAPN11Q9UMQ6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CAPN11Q9UMQ6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CAPN11Q9UMQ6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CAPN11Q9UMQ6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.17■■□□□ 1.14
CAPN11Q9UMQ6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CAPN11Q9UMQ6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.17■■□□□ 1.14
CAPN11Q9UMQ6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.17■■□□□ 1.14
CAPN11Q9UMQ6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC22.17■■□□□ 1.14
CAPN11Q9UMQ6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CAPN11Q9UMQ6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CAPN11Q9UMQ6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CAPN11Q9UMQ6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CAPN11Q9UMQ6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.16■■□□□ 1.14
CAPN11Q9UMQ6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
CAPN11Q9UMQ6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CAPN11Q9UMQ6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.16■■□□□ 1.14
CAPN11Q9UMQ6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CAPN11Q9UMQ6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.16■■□□□ 1.14
CAPN11Q9UMQ6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
CAPN11Q9UMQ6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CAPN11Q9UMQ6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CAPN11Q9UMQ6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CAPN11Q9UMQ6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.16■■□□□ 1.14
CAPN11Q9UMQ6 MIR6084-201ENST00000622012 110 ntBASIC22.16■■□□□ 1.14
CAPN11Q9UMQ6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC22.16■■□□□ 1.14
CAPN11Q9UMQ6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CAPN11Q9UMQ6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CAPN11Q9UMQ6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC22.16■■□□□ 1.14
CAPN11Q9UMQ6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CAPN11Q9UMQ6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CAPN11Q9UMQ6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CAPN11Q9UMQ6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CAPN11Q9UMQ6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CAPN11Q9UMQ6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CAPN11Q9UMQ6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CAPN11Q9UMQ6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.15■■□□□ 1.14
CAPN11Q9UMQ6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CAPN11Q9UMQ6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CAPN11Q9UMQ6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.15■■□□□ 1.14
CAPN11Q9UMQ6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CAPN11Q9UMQ6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CAPN11Q9UMQ6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CAPN11Q9UMQ6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.15■■□□□ 1.14
CAPN11Q9UMQ6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CAPN11Q9UMQ6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.15■■□□□ 1.14
CAPN11Q9UMQ6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.15■■□□□ 1.14
CAPN11Q9UMQ6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.15■■□□□ 1.14
CAPN11Q9UMQ6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
CAPN11Q9UMQ6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CAPN11Q9UMQ6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.15■■□□□ 1.14
CAPN11Q9UMQ6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CAPN11Q9UMQ6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
CAPN11Q9UMQ6 AC116050.2-201ENST00000612102 1779 ntBASIC22.15■■□□□ 1.14
CAPN11Q9UMQ6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.14■■□□□ 1.14
CAPN11Q9UMQ6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CAPN11Q9UMQ6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CAPN11Q9UMQ6 AC010141.2-201ENST00000452426 721 ntBASIC22.14■■□□□ 1.13
CAPN11Q9UMQ6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.14■■□□□ 1.13
CAPN11Q9UMQ6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CAPN11Q9UMQ6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
CAPN11Q9UMQ6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CAPN11Q9UMQ6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CAPN11Q9UMQ6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
CAPN11Q9UMQ6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CAPN11Q9UMQ6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC22.14■■□□□ 1.13
CAPN11Q9UMQ6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CAPN11Q9UMQ6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CAPN11Q9UMQ6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.14■■□□□ 1.13
CAPN11Q9UMQ6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.14■■□□□ 1.13
CAPN11Q9UMQ6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CAPN11Q9UMQ6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
CAPN11Q9UMQ6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CAPN11Q9UMQ6 AC120498.10-201ENST00000621827 505 ntBASIC22.13■■□□□ 1.13
CAPN11Q9UMQ6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CAPN11Q9UMQ6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms