Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSFQ9UBX1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.34■□□□□ 0.69
CTSFQ9UBX1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.34■□□□□ 0.69
CTSFQ9UBX1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTSFQ9UBX1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSFQ9UBX1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.34■□□□□ 0.69
CTSFQ9UBX1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTSFQ9UBX1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CTSFQ9UBX1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.34■□□□□ 0.69
CTSFQ9UBX1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.34■□□□□ 0.69
CTSFQ9UBX1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CTSFQ9UBX1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.33■□□□□ 0.69
CTSFQ9UBX1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CTSFQ9UBX1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CTSFQ9UBX1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CTSFQ9UBX1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTSFQ9UBX1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTSFQ9UBX1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTSFQ9UBX1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.33■□□□□ 0.68
CTSFQ9UBX1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CTSFQ9UBX1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.33■□□□□ 0.68
CTSFQ9UBX1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.33■□□□□ 0.68
CTSFQ9UBX1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.33■□□□□ 0.68
CTSFQ9UBX1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTSFQ9UBX1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTSFQ9UBX1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTSFQ9UBX1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
CTSFQ9UBX1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTSFQ9UBX1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTSFQ9UBX1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CTSFQ9UBX1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTSFQ9UBX1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CTSFQ9UBX1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CTSFQ9UBX1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTSFQ9UBX1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTSFQ9UBX1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTSFQ9UBX1 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.32■□□□□ 0.68
CTSFQ9UBX1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTSFQ9UBX1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTSFQ9UBX1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.32■□□□□ 0.68
CTSFQ9UBX1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.32■□□□□ 0.68
CTSFQ9UBX1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTSFQ9UBX1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.32■□□□□ 0.68
CTSFQ9UBX1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.32■□□□□ 0.68
CTSFQ9UBX1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CTSFQ9UBX1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTSFQ9UBX1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.31■□□□□ 0.68
CTSFQ9UBX1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CTSFQ9UBX1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTSFQ9UBX1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CTSFQ9UBX1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CTSFQ9UBX1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTSFQ9UBX1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTSFQ9UBX1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTSFQ9UBX1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.31■□□□□ 0.68
CTSFQ9UBX1 FAM201B-201ENST00000458407 597 ntBASIC19.31■□□□□ 0.68
CTSFQ9UBX1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.31■□□□□ 0.68
CTSFQ9UBX1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTSFQ9UBX1 AC105020.6-201ENST00000621523 1217 ntBASIC19.31■□□□□ 0.68
CTSFQ9UBX1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.31■□□□□ 0.68
CTSFQ9UBX1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTSFQ9UBX1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTSFQ9UBX1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 AC087633.2-202ENST00000565166 1439 ntBASIC19.3■□□□□ 0.68
CTSFQ9UBX1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSFQ9UBX1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTSFQ9UBX1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
CTSFQ9UBX1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTSFQ9UBX1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTSFQ9UBX1 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.29■□□□□ 0.68
CTSFQ9UBX1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTSFQ9UBX1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTSFQ9UBX1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTSFQ9UBX1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTSFQ9UBX1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.29■□□□□ 0.68
CTSFQ9UBX1 POU5F1P3-201ENST00000428824 1078 ntBASIC19.29■□□□□ 0.68
CTSFQ9UBX1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms