Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CCM2LQ9NUG4 BX842568.3-201ENST00000418104 571 ntBASIC19.47■□□□□ 0.71
CCM2LQ9NUG4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.47■□□□□ 0.71
CCM2LQ9NUG4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCM2LQ9NUG4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCM2LQ9NUG4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCM2LQ9NUG4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCM2LQ9NUG4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCM2LQ9NUG4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCM2LQ9NUG4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCM2LQ9NUG4 AC018445.3-201ENST00000624177 1945 ntBASIC19.47■□□□□ 0.71
CCM2LQ9NUG4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.46■□□□□ 0.71
CCM2LQ9NUG4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.46■□□□□ 0.71
CCM2LQ9NUG4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCM2LQ9NUG4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCM2LQ9NUG4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCM2LQ9NUG4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCM2LQ9NUG4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCM2LQ9NUG4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.46■□□□□ 0.71
CCM2LQ9NUG4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.46■□□□□ 0.71
CCM2LQ9NUG4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.46■□□□□ 0.71
CCM2LQ9NUG4 AC010525.1-201ENST00000585559 441 ntBASIC19.46■□□□□ 0.71
CCM2LQ9NUG4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CCM2LQ9NUG4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCM2LQ9NUG4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCM2LQ9NUG4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCM2LQ9NUG4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCM2LQ9NUG4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2LQ9NUG4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2LQ9NUG4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.45■□□□□ 0.7
CCM2LQ9NUG4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2LQ9NUG4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CCM2LQ9NUG4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
CCM2LQ9NUG4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CCM2LQ9NUG4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2LQ9NUG4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCM2LQ9NUG4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.45■□□□□ 0.7
CCM2LQ9NUG4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.45■□□□□ 0.7
CCM2LQ9NUG4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.45■□□□□ 0.7
CCM2LQ9NUG4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
CCM2LQ9NUG4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.45■□□□□ 0.7
CCM2LQ9NUG4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2LQ9NUG4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2LQ9NUG4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2LQ9NUG4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.45■□□□□ 0.7
CCM2LQ9NUG4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.45■□□□□ 0.7
CCM2LQ9NUG4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCM2LQ9NUG4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 DUX4L2-201ENST00000561772 1275 ntBASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 DUX4L6-201ENST00000626483 1275 ntBASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 DUX4L1-201ENST00000627662 1275 ntBASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 DUX4L8-201ENST00000629013 1275 ntBASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 DUX4L3-201ENST00000630187 1275 ntBASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 DUX4L7-201ENST00000630678 1275 ntBASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 DUX4L5-201ENST00000630834 1275 ntBASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.44■□□□□ 0.7
CCM2LQ9NUG4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CCM2LQ9NUG4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.43■□□□□ 0.7
CCM2LQ9NUG4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2LQ9NUG4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2LQ9NUG4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2LQ9NUG4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.43■□□□□ 0.7
CCM2LQ9NUG4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2LQ9NUG4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2LQ9NUG4 AC126544.1-201ENST00000580842 1059 ntBASIC19.43■□□□□ 0.7
CCM2LQ9NUG4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2LQ9NUG4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2LQ9NUG4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.43■□□□□ 0.7
CCM2LQ9NUG4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2LQ9NUG4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCM2LQ9NUG4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.43■□□□□ 0.7
CCM2LQ9NUG4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2LQ9NUG4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.43■□□□□ 0.7
CCM2LQ9NUG4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCM2LQ9NUG4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.43■□□□□ 0.7
CCM2LQ9NUG4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCM2LQ9NUG4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms