Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.04■□□□□ 0.64
CTPS2Q9NRF8 RARRES2P6-201ENST00000567333 442 ntBASIC19.04■□□□□ 0.64
CTPS2Q9NRF8 AC138907.5-202ENST00000569484 235 ntBASIC19.04■□□□□ 0.64
CTPS2Q9NRF8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTPS2Q9NRF8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CTPS2Q9NRF8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTPS2Q9NRF8 AC007225.1-201ENST00000566331 1836 ntBASIC19.04■□□□□ 0.64
CTPS2Q9NRF8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTPS2Q9NRF8 AP004607.4-201ENST00000530158 1459 ntBASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 AC026271.2-201ENST00000428091 497 ntBASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 GABARAPL3-202ENST00000624044 1851 ntBASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTPS2Q9NRF8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
CTPS2Q9NRF8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CTPS2Q9NRF8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CTPS2Q9NRF8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTPS2Q9NRF8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTPS2Q9NRF8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTPS2Q9NRF8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.02■□□□□ 0.64
CTPS2Q9NRF8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTPS2Q9NRF8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CTPS2Q9NRF8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CTPS2Q9NRF8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.02■□□□□ 0.64
CTPS2Q9NRF8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.02■□□□□ 0.64
CTPS2Q9NRF8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.02■□□□□ 0.64
CTPS2Q9NRF8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.02■□□□□ 0.64
CTPS2Q9NRF8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CTPS2Q9NRF8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CTPS2Q9NRF8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.01■□□□□ 0.63
CTPS2Q9NRF8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTPS2Q9NRF8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTPS2Q9NRF8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CTPS2Q9NRF8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTPS2Q9NRF8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.01■□□□□ 0.63
CTPS2Q9NRF8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTPS2Q9NRF8 AC008175.2-201ENST00000612840 297 ntBASIC19.01■□□□□ 0.63
CTPS2Q9NRF8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CTPS2Q9NRF8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTPS2Q9NRF8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTPS2Q9NRF8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.01■□□□□ 0.63
CTPS2Q9NRF8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTPS2Q9NRF8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTPS2Q9NRF8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19■□□□□ 0.63
CTPS2Q9NRF8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTPS2Q9NRF8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTPS2Q9NRF8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19■□□□□ 0.63
CTPS2Q9NRF8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CTPS2Q9NRF8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19■□□□□ 0.63
CTPS2Q9NRF8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTPS2Q9NRF8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19■□□□□ 0.63
CTPS2Q9NRF8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19■□□□□ 0.63
CTPS2Q9NRF8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19■□□□□ 0.63
CTPS2Q9NRF8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19■□□□□ 0.63
CTPS2Q9NRF8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19■□□□□ 0.63
CTPS2Q9NRF8 AC010141.2-201ENST00000452426 721 ntBASIC19■□□□□ 0.63
CTPS2Q9NRF8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19■□□□□ 0.63
CTPS2Q9NRF8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19■□□□□ 0.63
CTPS2Q9NRF8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTPS2Q9NRF8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19■□□□□ 0.63
CTPS2Q9NRF8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19■□□□□ 0.63
CTPS2Q9NRF8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19■□□□□ 0.63
CTPS2Q9NRF8 KRT18P61-201ENST00000585825 1298 ntBASIC19■□□□□ 0.63
CTPS2Q9NRF8 AP001160.3-201ENST00000601484 763 ntBASIC19■□□□□ 0.63
CTPS2Q9NRF8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CTPS2Q9NRF8 BID-203ENST00000399765 1879 ntTSL 2 BASIC19■□□□□ 0.63
CTPS2Q9NRF8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19■□□□□ 0.63
CTPS2Q9NRF8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
CTPS2Q9NRF8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTPS2Q9NRF8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19■□□□□ 0.63
CTPS2Q9NRF8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CTPS2Q9NRF8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
CTPS2Q9NRF8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTPS2Q9NRF8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CTPS2Q9NRF8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTPS2Q9NRF8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTPS2Q9NRF8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTPS2Q9NRF8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.99■□□□□ 0.63
CTPS2Q9NRF8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms