Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.86■■□□□ 1.09
TLR9Q9NR96 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TLR9Q9NR96 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
TLR9Q9NR96 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.86■■□□□ 1.09
TLR9Q9NR96 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TLR9Q9NR96 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TLR9Q9NR96 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TLR9Q9NR96 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.86■■□□□ 1.09
TLR9Q9NR96 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TLR9Q9NR96 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
TLR9Q9NR96 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.86■■□□□ 1.09
TLR9Q9NR96 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TLR9Q9NR96 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.86■■□□□ 1.09
TLR9Q9NR96 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TLR9Q9NR96 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TLR9Q9NR96 AC087633.2-202ENST00000565166 1439 ntBASIC21.86■■□□□ 1.09
TLR9Q9NR96 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TLR9Q9NR96 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.86■■□□□ 1.09
TLR9Q9NR96 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.86■■□□□ 1.09
TLR9Q9NR96 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TLR9Q9NR96 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
TLR9Q9NR96 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TLR9Q9NR96 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.85■■□□□ 1.09
TLR9Q9NR96 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TLR9Q9NR96 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TLR9Q9NR96 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
TLR9Q9NR96 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TLR9Q9NR96 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.85■■□□□ 1.09
TLR9Q9NR96 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TLR9Q9NR96 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.85■■□□□ 1.09
TLR9Q9NR96 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.85■■□□□ 1.09
TLR9Q9NR96 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.85■■□□□ 1.09
TLR9Q9NR96 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.85■■□□□ 1.09
TLR9Q9NR96 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TLR9Q9NR96 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.85■■□□□ 1.09
TLR9Q9NR96 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TLR9Q9NR96 AP001412.1-201ENST00000608405 714 ntBASIC21.85■■□□□ 1.09
TLR9Q9NR96 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.85■■□□□ 1.09
TLR9Q9NR96 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TLR9Q9NR96 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TLR9Q9NR96 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
TLR9Q9NR96 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TLR9Q9NR96 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
TLR9Q9NR96 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.84■■□□□ 1.09
TLR9Q9NR96 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TLR9Q9NR96 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TLR9Q9NR96 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
TLR9Q9NR96 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TLR9Q9NR96 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
TLR9Q9NR96 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
TLR9Q9NR96 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.84■■□□□ 1.09
TLR9Q9NR96 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
TLR9Q9NR96 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
TLR9Q9NR96 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.84■■□□□ 1.09
TLR9Q9NR96 AC120498.8-201ENST00000614275 531 ntBASIC21.84■■□□□ 1.09
TLR9Q9NR96 AL049637.2-201ENST00000641778 930 ntBASIC21.84■■□□□ 1.09
TLR9Q9NR96 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
TLR9Q9NR96 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.84■■□□□ 1.09
TLR9Q9NR96 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TLR9Q9NR96 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TLR9Q9NR96 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
TLR9Q9NR96 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TLR9Q9NR96 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TLR9Q9NR96 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.83■■□□□ 1.09
TLR9Q9NR96 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TLR9Q9NR96 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TLR9Q9NR96 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.83■■□□□ 1.09
TLR9Q9NR96 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
TLR9Q9NR96 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
TLR9Q9NR96 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.83■■□□□ 1.09
TLR9Q9NR96 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.83■■□□□ 1.09
TLR9Q9NR96 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TLR9Q9NR96 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TLR9Q9NR96 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TLR9Q9NR96 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TLR9Q9NR96 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
TLR9Q9NR96 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
TLR9Q9NR96 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TLR9Q9NR96 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TLR9Q9NR96 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.82■■□□□ 1.08
TLR9Q9NR96 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.82■■□□□ 1.08
TLR9Q9NR96 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TLR9Q9NR96 AL135905.2-201ENST00000584934 1404 ntBASIC21.82■■□□□ 1.08
TLR9Q9NR96 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TLR9Q9NR96 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TLR9Q9NR96 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TLR9Q9NR96 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TLR9Q9NR96 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TLR9Q9NR96 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.82■■□□□ 1.08
TLR9Q9NR96 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
TLR9Q9NR96 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
TLR9Q9NR96 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.82■■□□□ 1.08
TLR9Q9NR96 PGM5P4-201ENST00000421970 445 ntBASIC21.82■■□□□ 1.08
TLR9Q9NR96 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.82■■□□□ 1.08
TLR9Q9NR96 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.82■■□□□ 1.08
TLR9Q9NR96 KRT18P21-201ENST00000515767 1272 ntBASIC21.82■■□□□ 1.08
TLR9Q9NR96 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.82■■□□□ 1.08
TLR9Q9NR96 AC005829.2-201ENST00000571422 1056 ntBASIC21.82■■□□□ 1.08
TLR9Q9NR96 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.82■■□□□ 1.08
TLR9Q9NR96 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms