Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 FZD10-202ENST00000539839 3282 ntBASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 MIR4466-201ENST00000606121 54 ntBASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.72■□□□□ 0.43
C12orf4Q9NQ89 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C12orf4Q9NQ89 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
C12orf4Q9NQ89 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
C12orf4Q9NQ89 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C12orf4Q9NQ89 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C12orf4Q9NQ89 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
C12orf4Q9NQ89 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.71■□□□□ 0.43
C12orf4Q9NQ89 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.71■□□□□ 0.43
C12orf4Q9NQ89 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
C12orf4Q9NQ89 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.71■□□□□ 0.43
C12orf4Q9NQ89 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
C12orf4Q9NQ89 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C12orf4Q9NQ89 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
C12orf4Q9NQ89 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
C12orf4Q9NQ89 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
C12orf4Q9NQ89 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
C12orf4Q9NQ89 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.71■□□□□ 0.43
C12orf4Q9NQ89 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
C12orf4Q9NQ89 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
C12orf4Q9NQ89 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
C12orf4Q9NQ89 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
C12orf4Q9NQ89 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms