Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRF2Q9HAW0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
BRF2Q9HAW0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRF2Q9HAW0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
BRF2Q9HAW0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.62■□□□□ 0.73
BRF2Q9HAW0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.62■□□□□ 0.73
BRF2Q9HAW0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BRF2Q9HAW0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
BRF2Q9HAW0 KRT18P11-201ENST00000435214 1283 ntBASIC19.62■□□□□ 0.73
BRF2Q9HAW0 CDV3P1-201ENST00000471403 739 ntBASIC19.62■□□□□ 0.73
BRF2Q9HAW0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.62■□□□□ 0.73
BRF2Q9HAW0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
BRF2Q9HAW0 AC087623.3-201ENST00000607047 1098 ntBASIC19.62■□□□□ 0.73
BRF2Q9HAW0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRF2Q9HAW0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRF2Q9HAW0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BRF2Q9HAW0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.62■□□□□ 0.73
BRF2Q9HAW0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.62■□□□□ 0.73
BRF2Q9HAW0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.62■□□□□ 0.73
BRF2Q9HAW0 AC092720.2-201ENST00000602388 1665 ntBASIC19.62■□□□□ 0.73
BRF2Q9HAW0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
BRF2Q9HAW0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.61■□□□□ 0.73
BRF2Q9HAW0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRF2Q9HAW0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRF2Q9HAW0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
BRF2Q9HAW0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.61■□□□□ 0.73
BRF2Q9HAW0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
BRF2Q9HAW0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRF2Q9HAW0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.61■□□□□ 0.73
BRF2Q9HAW0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
BRF2Q9HAW0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRF2Q9HAW0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.61■□□□□ 0.73
BRF2Q9HAW0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRF2Q9HAW0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRF2Q9HAW0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.61■□□□□ 0.73
BRF2Q9HAW0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRF2Q9HAW0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRF2Q9HAW0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRF2Q9HAW0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRF2Q9HAW0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
BRF2Q9HAW0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRF2Q9HAW0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRF2Q9HAW0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRF2Q9HAW0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
BRF2Q9HAW0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
BRF2Q9HAW0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRF2Q9HAW0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
BRF2Q9HAW0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BRF2Q9HAW0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRF2Q9HAW0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
BRF2Q9HAW0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.6■□□□□ 0.73
BRF2Q9HAW0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
BRF2Q9HAW0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRF2Q9HAW0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRF2Q9HAW0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
BRF2Q9HAW0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
BRF2Q9HAW0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRF2Q9HAW0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BRF2Q9HAW0 AL162377.1-201ENST00000618844 1793 ntBASIC19.6■□□□□ 0.73
BRF2Q9HAW0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.6■□□□□ 0.73
BRF2Q9HAW0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRF2Q9HAW0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BRF2Q9HAW0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
BRF2Q9HAW0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BRF2Q9HAW0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
BRF2Q9HAW0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.59■□□□□ 0.73
BRF2Q9HAW0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
BRF2Q9HAW0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRF2Q9HAW0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.59■□□□□ 0.73
BRF2Q9HAW0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
BRF2Q9HAW0 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.59■□□□□ 0.73
BRF2Q9HAW0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.59■□□□□ 0.73
BRF2Q9HAW0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.59■□□□□ 0.73
BRF2Q9HAW0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRF2Q9HAW0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
BRF2Q9HAW0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.59■□□□□ 0.73
BRF2Q9HAW0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BRF2Q9HAW0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRF2Q9HAW0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
BRF2Q9HAW0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.58■□□□□ 0.73
BRF2Q9HAW0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRF2Q9HAW0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRF2Q9HAW0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
BRF2Q9HAW0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRF2Q9HAW0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRF2Q9HAW0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
BRF2Q9HAW0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
BRF2Q9HAW0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.58■□□□□ 0.73
BRF2Q9HAW0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms