Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.22■□□□□ 0.83
POLR1BQ9H9Y6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR1BQ9H9Y6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR1BQ9H9Y6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.22■□□□□ 0.83
POLR1BQ9H9Y6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.22■□□□□ 0.83
POLR1BQ9H9Y6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
POLR1BQ9H9Y6 AC008175.2-201ENST00000612840 297 ntBASIC20.22■□□□□ 0.83
POLR1BQ9H9Y6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.22■□□□□ 0.83
POLR1BQ9H9Y6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
POLR1BQ9H9Y6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR1BQ9H9Y6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR1BQ9H9Y6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
POLR1BQ9H9Y6 AP006587.3-201ENST00000525742 1516 ntBASIC20.22■□□□□ 0.83
POLR1BQ9H9Y6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
POLR1BQ9H9Y6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
POLR1BQ9H9Y6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POLR1BQ9H9Y6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR1BQ9H9Y6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR1BQ9H9Y6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
POLR1BQ9H9Y6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.21■□□□□ 0.83
POLR1BQ9H9Y6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR1BQ9H9Y6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
POLR1BQ9H9Y6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR1BQ9H9Y6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POLR1BQ9H9Y6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POLR1BQ9H9Y6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POLR1BQ9H9Y6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR1BQ9H9Y6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR1BQ9H9Y6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
POLR1BQ9H9Y6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR1BQ9H9Y6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLR1BQ9H9Y6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
POLR1BQ9H9Y6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
POLR1BQ9H9Y6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
POLR1BQ9H9Y6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.2■□□□□ 0.82
POLR1BQ9H9Y6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.2■□□□□ 0.82
POLR1BQ9H9Y6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
POLR1BQ9H9Y6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.2■□□□□ 0.82
POLR1BQ9H9Y6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.2■□□□□ 0.82
POLR1BQ9H9Y6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
POLR1BQ9H9Y6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLR1BQ9H9Y6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
POLR1BQ9H9Y6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
POLR1BQ9H9Y6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLR1BQ9H9Y6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 AL157384.1-201ENST00000445995 2473 ntBASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 AL162412.1-201ENST00000567129 965 ntBASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLR1BQ9H9Y6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
POLR1BQ9H9Y6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
POLR1BQ9H9Y6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
POLR1BQ9H9Y6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
POLR1BQ9H9Y6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.18■□□□□ 0.82
POLR1BQ9H9Y6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
POLR1BQ9H9Y6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
POLR1BQ9H9Y6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
POLR1BQ9H9Y6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.18■□□□□ 0.82
POLR1BQ9H9Y6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.18■□□□□ 0.82
POLR1BQ9H9Y6 POU5F1P4-201ENST00000413175 1085 ntBASIC20.18■□□□□ 0.82
POLR1BQ9H9Y6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
POLR1BQ9H9Y6 AC091874.3-201ENST00000512672 1195 ntBASIC20.18■□□□□ 0.82
POLR1BQ9H9Y6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
POLR1BQ9H9Y6 AC006058.3-201ENST00000606217 1069 ntBASIC20.18■□□□□ 0.82
POLR1BQ9H9Y6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
POLR1BQ9H9Y6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
POLR1BQ9H9Y6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
POLR1BQ9H9Y6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
POLR1BQ9H9Y6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
POLR1BQ9H9Y6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
POLR1BQ9H9Y6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
POLR1BQ9H9Y6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.17■□□□□ 0.82
POLR1BQ9H9Y6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
POLR1BQ9H9Y6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.17■□□□□ 0.82
POLR1BQ9H9Y6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
POLR1BQ9H9Y6 AL158047.1-201ENST00000445918 881 ntBASIC20.17■□□□□ 0.82
POLR1BQ9H9Y6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.17■□□□□ 0.82
POLR1BQ9H9Y6 AC142381.4-202ENST00000563973 229 ntBASIC20.17■□□□□ 0.82
POLR1BQ9H9Y6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
POLR1BQ9H9Y6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms