Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SCAF1Q9H7N4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SCAF1Q9H7N4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC30.41■■■□□ 2.46
SCAF1Q9H7N4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC30.41■■■□□ 2.46
SCAF1Q9H7N4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC30.41■■■□□ 2.46
SCAF1Q9H7N4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SCAF1Q9H7N4 AC013268.1-206ENST00000638368 961 ntBASIC30.41■■■□□ 2.46
SCAF1Q9H7N4 AC112229.1-201ENST00000639295 961 ntBASIC30.41■■■□□ 2.46
SCAF1Q9H7N4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
SCAF1Q9H7N4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SCAF1Q9H7N4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC30.4■■■□□ 2.46
SCAF1Q9H7N4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SCAF1Q9H7N4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
SCAF1Q9H7N4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC30.4■■■□□ 2.46
SCAF1Q9H7N4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SCAF1Q9H7N4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
SCAF1Q9H7N4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SCAF1Q9H7N4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC30.4■■■□□ 2.46
SCAF1Q9H7N4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
SCAF1Q9H7N4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SCAF1Q9H7N4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SCAF1Q9H7N4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC30.4■■■□□ 2.46
SCAF1Q9H7N4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC30.4■■■□□ 2.46
SCAF1Q9H7N4 AP003097.1-201ENST00000530657 1135 ntBASIC30.4■■■□□ 2.46
SCAF1Q9H7N4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC30.4■■■□□ 2.46
SCAF1Q9H7N4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SCAF1Q9H7N4 AL445228.2-201ENST00000605589 952 ntBASIC30.4■■■□□ 2.46
SCAF1Q9H7N4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
SCAF1Q9H7N4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SCAF1Q9H7N4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SCAF1Q9H7N4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SCAF1Q9H7N4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SCAF1Q9H7N4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
SCAF1Q9H7N4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC30.39■■■□□ 2.46
SCAF1Q9H7N4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC30.39■■■□□ 2.46
SCAF1Q9H7N4 AC008694.1-202ENST00000636953 945 ntBASIC30.39■■■□□ 2.46
SCAF1Q9H7N4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
SCAF1Q9H7N4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SCAF1Q9H7N4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.45
SCAF1Q9H7N4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC30.38■■■□□ 2.45
SCAF1Q9H7N4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC30.38■■■□□ 2.45
SCAF1Q9H7N4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF1Q9H7N4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF1Q9H7N4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF1Q9H7N4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF1Q9H7N4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
SCAF1Q9H7N4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF1Q9H7N4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF1Q9H7N4 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC30.38■■■□□ 2.45
SCAF1Q9H7N4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF1Q9H7N4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC30.38■■■□□ 2.45
SCAF1Q9H7N4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF1Q9H7N4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SCAF1Q9H7N4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
SCAF1Q9H7N4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
SCAF1Q9H7N4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
SCAF1Q9H7N4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC30.37■■■□□ 2.45
SCAF1Q9H7N4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SCAF1Q9H7N4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC30.37■■■□□ 2.45
SCAF1Q9H7N4 H19-210ENST00000439725 1929 ntTSL 2 BASIC30.37■■■□□ 2.45
SCAF1Q9H7N4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SCAF1Q9H7N4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SCAF1Q9H7N4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC30.37■■■□□ 2.45
SCAF1Q9H7N4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC30.37■■■□□ 2.45
SCAF1Q9H7N4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SCAF1Q9H7N4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SCAF1Q9H7N4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SCAF1Q9H7N4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
SCAF1Q9H7N4 AC079630.1-202ENST00000618127 1840 ntBASIC30.37■■■□□ 2.45
SCAF1Q9H7N4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC30.37■■■□□ 2.45
SCAF1Q9H7N4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC30.36■■■□□ 2.45
SCAF1Q9H7N4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
SCAF1Q9H7N4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
SCAF1Q9H7N4 LINC01529-204ENST00000636474 1715 ntBASIC30.36■■■□□ 2.45
SCAF1Q9H7N4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC30.36■■■□□ 2.45
SCAF1Q9H7N4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SCAF1Q9H7N4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SCAF1Q9H7N4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SCAF1Q9H7N4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SCAF1Q9H7N4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SCAF1Q9H7N4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC30.36■■■□□ 2.45
SCAF1Q9H7N4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC30.36■■■□□ 2.45
SCAF1Q9H7N4 AC120057.1-201ENST00000483947 663 ntBASIC30.36■■■□□ 2.45
SCAF1Q9H7N4 OR10C1-204ENST00000622521 1039 ntBASIC30.36■■■□□ 2.45
SCAF1Q9H7N4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC30.36■■■□□ 2.45
SCAF1Q9H7N4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC30.36■■■□□ 2.45
SCAF1Q9H7N4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
SCAF1Q9H7N4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
SCAF1Q9H7N4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SCAF1Q9H7N4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SCAF1Q9H7N4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
SCAF1Q9H7N4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
SCAF1Q9H7N4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SCAF1Q9H7N4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC30.35■■■□□ 2.45
SCAF1Q9H7N4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC30.35■■■□□ 2.45
SCAF1Q9H7N4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SCAF1Q9H7N4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SCAF1Q9H7N4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC30.35■■■□□ 2.45
SCAF1Q9H7N4 AC005224.4-201ENST00000583262 1652 ntBASIC30.35■■■□□ 2.45
SCAF1Q9H7N4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms