Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
UBQLN3Q9H347 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19■□□□□ 0.63
UBQLN3Q9H347 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBQLN3Q9H347 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBQLN3Q9H347 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19■□□□□ 0.63
UBQLN3Q9H347 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBQLN3Q9H347 APTR-203ENST00000430801 583 ntTSL 5 BASIC19■□□□□ 0.63
UBQLN3Q9H347 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19■□□□□ 0.63
UBQLN3Q9H347 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
UBQLN3Q9H347 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19■□□□□ 0.63
UBQLN3Q9H347 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
UBQLN3Q9H347 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19■□□□□ 0.63
UBQLN3Q9H347 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19■□□□□ 0.63
UBQLN3Q9H347 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBQLN3Q9H347 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
UBQLN3Q9H347 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBQLN3Q9H347 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19■□□□□ 0.63
UBQLN3Q9H347 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN3Q9H347 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
UBQLN3Q9H347 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN3Q9H347 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN3Q9H347 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN3Q9H347 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.99■□□□□ 0.63
UBQLN3Q9H347 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.99■□□□□ 0.63
UBQLN3Q9H347 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.99■□□□□ 0.63
UBQLN3Q9H347 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN3Q9H347 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.99■□□□□ 0.63
UBQLN3Q9H347 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
UBQLN3Q9H347 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN3Q9H347 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
UBQLN3Q9H347 AC068338.2-201ENST00000563278 1430 ntBASIC18.99■□□□□ 0.63
UBQLN3Q9H347 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.99■□□□□ 0.63
UBQLN3Q9H347 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
UBQLN3Q9H347 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBQLN3Q9H347 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.98■□□□□ 0.63
UBQLN3Q9H347 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.98■□□□□ 0.63
UBQLN3Q9H347 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBQLN3Q9H347 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.98■□□□□ 0.63
UBQLN3Q9H347 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBQLN3Q9H347 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBQLN3Q9H347 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.98■□□□□ 0.63
UBQLN3Q9H347 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.98■□□□□ 0.63
UBQLN3Q9H347 AC104771.1-201ENST00000603335 964 ntBASIC18.98■□□□□ 0.63
UBQLN3Q9H347 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBQLN3Q9H347 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
UBQLN3Q9H347 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBQLN3Q9H347 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.98■□□□□ 0.63
UBQLN3Q9H347 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBQLN3Q9H347 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBQLN3Q9H347 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBQLN3Q9H347 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBQLN3Q9H347 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBQLN3Q9H347 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.97■□□□□ 0.63
UBQLN3Q9H347 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN3Q9H347 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.97■□□□□ 0.63
UBQLN3Q9H347 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
UBQLN3Q9H347 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN3Q9H347 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN3Q9H347 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN3Q9H347 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
UBQLN3Q9H347 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.97■□□□□ 0.63
UBQLN3Q9H347 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
UBQLN3Q9H347 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
UBQLN3Q9H347 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN3Q9H347 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN3Q9H347 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN3Q9H347 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.97■□□□□ 0.63
UBQLN3Q9H347 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.97■□□□□ 0.63
UBQLN3Q9H347 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN3Q9H347 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.96■□□□□ 0.63
UBQLN3Q9H347 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN3Q9H347 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN3Q9H347 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
UBQLN3Q9H347 GPX1P1-201ENST00000388829 606 ntBASIC18.96■□□□□ 0.63
UBQLN3Q9H347 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.96■□□□□ 0.63
UBQLN3Q9H347 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN3Q9H347 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.96■□□□□ 0.63
UBQLN3Q9H347 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN3Q9H347 AC133552.2-202ENST00000575694 574 ntBASIC18.96■□□□□ 0.63
UBQLN3Q9H347 AL121832.2-201ENST00000610979 668 ntBASIC18.96■□□□□ 0.63
UBQLN3Q9H347 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN3Q9H347 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.96■□□□□ 0.63
UBQLN3Q9H347 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.96■□□□□ 0.63
UBQLN3Q9H347 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.96■□□□□ 0.63
UBQLN3Q9H347 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN3Q9H347 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN3Q9H347 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN3Q9H347 AC006128.1-201ENST00000624704 1661 ntBASIC18.95■□□□□ 0.62
UBQLN3Q9H347 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.95■□□□□ 0.62
UBQLN3Q9H347 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN3Q9H347 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN3Q9H347 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN3Q9H347 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN3Q9H347 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.95■□□□□ 0.62
UBQLN3Q9H347 CYP2T1P-201ENST00000432607 1285 ntBASIC18.95■□□□□ 0.62
UBQLN3Q9H347 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.95■□□□□ 0.62
UBQLN3Q9H347 AL162412.1-201ENST00000567129 965 ntBASIC18.95■□□□□ 0.62
UBQLN3Q9H347 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.95■□□□□ 0.62
UBQLN3Q9H347 AL109923.1-201ENST00000618799 583 ntBASIC18.95■□□□□ 0.62
UBQLN3Q9H347 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms