Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCX3BQ9H321 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
VCX3BQ9H321 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
VCX3BQ9H321 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
VCX3BQ9H321 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCX3BQ9H321 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.53■□□□□ 0.72
VCX3BQ9H321 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCX3BQ9H321 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCX3BQ9H321 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VCX3BQ9H321 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
VCX3BQ9H321 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
VCX3BQ9H321 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VCX3BQ9H321 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VCX3BQ9H321 AC003102.1-202ENST00000563394 1796 ntBASIC19.52■□□□□ 0.72
VCX3BQ9H321 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VCX3BQ9H321 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.52■□□□□ 0.72
VCX3BQ9H321 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VCX3BQ9H321 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VCX3BQ9H321 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VCX3BQ9H321 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VCX3BQ9H321 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.52■□□□□ 0.72
VCX3BQ9H321 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.52■□□□□ 0.72
VCX3BQ9H321 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.52■□□□□ 0.72
VCX3BQ9H321 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
VCX3BQ9H321 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
VCX3BQ9H321 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.52■□□□□ 0.72
VCX3BQ9H321 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
VCX3BQ9H321 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
VCX3BQ9H321 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
VCX3BQ9H321 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
VCX3BQ9H321 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
VCX3BQ9H321 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
VCX3BQ9H321 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.52■□□□□ 0.71
VCX3BQ9H321 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCX3BQ9H321 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCX3BQ9H321 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCX3BQ9H321 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VCX3BQ9H321 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCX3BQ9H321 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCX3BQ9H321 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCX3BQ9H321 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCX3BQ9H321 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VCX3BQ9H321 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCX3BQ9H321 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCX3BQ9H321 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.51■□□□□ 0.71
VCX3BQ9H321 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCX3BQ9H321 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.51■□□□□ 0.71
VCX3BQ9H321 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
VCX3BQ9H321 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
VCX3BQ9H321 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCX3BQ9H321 BCL2-203ENST00000589955 5011 ntBASIC19.51■□□□□ 0.71
VCX3BQ9H321 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCX3BQ9H321 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCX3BQ9H321 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCX3BQ9H321 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCX3BQ9H321 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VCX3BQ9H321 AC120498.9-201ENST00000339021 3867 ntBASIC19.51■□□□□ 0.71
VCX3BQ9H321 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.5■□□□□ 0.71
VCX3BQ9H321 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
VCX3BQ9H321 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
VCX3BQ9H321 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VCX3BQ9H321 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
VCX3BQ9H321 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.5■□□□□ 0.71
VCX3BQ9H321 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VCX3BQ9H321 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VCX3BQ9H321 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.5■□□□□ 0.71
VCX3BQ9H321 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VCX3BQ9H321 FP700111.2-201ENST00000619190 1892 ntBASIC19.5■□□□□ 0.71
VCX3BQ9H321 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VCX3BQ9H321 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.49■□□□□ 0.71
VCX3BQ9H321 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCX3BQ9H321 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
VCX3BQ9H321 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCX3BQ9H321 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VCX3BQ9H321 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCX3BQ9H321 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VCX3BQ9H321 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCX3BQ9H321 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCX3BQ9H321 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.49■□□□□ 0.71
VCX3BQ9H321 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCX3BQ9H321 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.49■□□□□ 0.71
VCX3BQ9H321 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCX3BQ9H321 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCX3BQ9H321 GPX1-201ENST00000419349 1106 ntBASIC19.49■□□□□ 0.71
VCX3BQ9H321 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.49■□□□□ 0.71
VCX3BQ9H321 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
VCX3BQ9H321 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.49■□□□□ 0.71
VCX3BQ9H321 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VCX3BQ9H321 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VCX3BQ9H321 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.48■□□□□ 0.71
VCX3BQ9H321 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
VCX3BQ9H321 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCX3BQ9H321 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VCX3BQ9H321 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.48■□□□□ 0.71
VCX3BQ9H321 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
VCX3BQ9H321 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.48■□□□□ 0.71
VCX3BQ9H321 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.48■□□□□ 0.71
VCX3BQ9H321 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.48■□□□□ 0.71
VCX3BQ9H321 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.48■□□□□ 0.71
VCX3BQ9H321 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms