Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.61■□□□□ 0.89
VPS11Q9H270 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VPS11Q9H270 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.61■□□□□ 0.89
VPS11Q9H270 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.61■□□□□ 0.89
VPS11Q9H270 AC112907.3-201ENST00000577781 2400 ntBASIC20.61■□□□□ 0.89
VPS11Q9H270 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.61■□□□□ 0.89
VPS11Q9H270 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.61■□□□□ 0.89
VPS11Q9H270 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.61■□□□□ 0.89
VPS11Q9H270 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VPS11Q9H270 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.61■□□□□ 0.89
VPS11Q9H270 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VPS11Q9H270 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
VPS11Q9H270 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
VPS11Q9H270 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VPS11Q9H270 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS11Q9H270 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS11Q9H270 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS11Q9H270 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS11Q9H270 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS11Q9H270 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.6■□□□□ 0.89
VPS11Q9H270 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VPS11Q9H270 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS11Q9H270 EDA-201ENST00000338901 1233 ntBASIC20.6■□□□□ 0.89
VPS11Q9H270 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.6■□□□□ 0.89
VPS11Q9H270 AF213884.3-201ENST00000563833 479 ntBASIC20.6■□□□□ 0.89
VPS11Q9H270 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.6■□□□□ 0.89
VPS11Q9H270 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS11Q9H270 RASA4CP-201ENST00000424092 1398 ntBASIC20.59■□□□□ 0.89
VPS11Q9H270 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS11Q9H270 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS11Q9H270 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS11Q9H270 AC099778.1-201ENST00000568593 1911 ntBASIC20.59■□□□□ 0.89
VPS11Q9H270 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS11Q9H270 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.59■□□□□ 0.89
VPS11Q9H270 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS11Q9H270 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.59■□□□□ 0.89
VPS11Q9H270 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.59■□□□□ 0.89
VPS11Q9H270 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.59■□□□□ 0.89
VPS11Q9H270 AL355001.2-201ENST00000620617 1191 ntBASIC20.59■□□□□ 0.89
VPS11Q9H270 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS11Q9H270 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS11Q9H270 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS11Q9H270 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.59■□□□□ 0.89
VPS11Q9H270 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS11Q9H270 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
VPS11Q9H270 AC061975.6-201ENST00000579045 1553 ntBASIC20.59■□□□□ 0.89
VPS11Q9H270 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS11Q9H270 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.58■□□□□ 0.89
VPS11Q9H270 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VPS11Q9H270 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VPS11Q9H270 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VPS11Q9H270 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VPS11Q9H270 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
VPS11Q9H270 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.58■□□□□ 0.89
VPS11Q9H270 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VPS11Q9H270 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.58■□□□□ 0.89
VPS11Q9H270 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.58■□□□□ 0.89
VPS11Q9H270 EEF1DP3-203ENST00000566025 782 ntBASIC20.58■□□□□ 0.89
VPS11Q9H270 AC053503.5-201ENST00000601508 636 ntBASIC20.58■□□□□ 0.89
VPS11Q9H270 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VPS11Q9H270 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.58■□□□□ 0.88
VPS11Q9H270 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
VPS11Q9H270 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VPS11Q9H270 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
VPS11Q9H270 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
VPS11Q9H270 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS11Q9H270 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.57■□□□□ 0.88
VPS11Q9H270 AP004607.4-201ENST00000530158 1459 ntBASIC20.57■□□□□ 0.88
VPS11Q9H270 MIR939-201ENST00000401314 82 ntBASIC20.57■□□□□ 0.88
VPS11Q9H270 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
VPS11Q9H270 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS11Q9H270 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS11Q9H270 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS11Q9H270 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.57■□□□□ 0.88
VPS11Q9H270 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.57■□□□□ 0.88
VPS11Q9H270 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS11Q9H270 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS11Q9H270 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS11Q9H270 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VPS11Q9H270 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS11Q9H270 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS11Q9H270 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.56■□□□□ 0.88
VPS11Q9H270 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.56■□□□□ 0.88
VPS11Q9H270 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS11Q9H270 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VPS11Q9H270 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.56■□□□□ 0.88
VPS11Q9H270 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.56■□□□□ 0.88
VPS11Q9H270 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS11Q9H270 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS11Q9H270 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS11Q9H270 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS11Q9H270 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS11Q9H270 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.56■□□□□ 0.88
VPS11Q9H270 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS11Q9H270 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.55■□□□□ 0.88
VPS11Q9H270 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
VPS11Q9H270 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.55■□□□□ 0.88
VPS11Q9H270 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
VPS11Q9H270 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VPS11Q9H270 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms