Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS16Q9H269 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.52■■□□□ 1.2
VPS16Q9H269 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS16Q9H269 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.52■■□□□ 1.2
VPS16Q9H269 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.52■■□□□ 1.2
VPS16Q9H269 AC138907.5-202ENST00000569484 235 ntBASIC22.52■■□□□ 1.2
VPS16Q9H269 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.52■■□□□ 1.2
VPS16Q9H269 AC099778.1-201ENST00000568593 1911 ntBASIC22.52■■□□□ 1.2
VPS16Q9H269 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS16Q9H269 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
VPS16Q9H269 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.52■■□□□ 1.2
VPS16Q9H269 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS16Q9H269 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
VPS16Q9H269 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
VPS16Q9H269 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.51■■□□□ 1.19
VPS16Q9H269 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
VPS16Q9H269 AC105265.2-201ENST00000467189 838 ntBASIC22.51■■□□□ 1.19
VPS16Q9H269 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
VPS16Q9H269 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.51■■□□□ 1.19
VPS16Q9H269 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.51■■□□□ 1.19
VPS16Q9H269 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
VPS16Q9H269 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
VPS16Q9H269 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
VPS16Q9H269 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
VPS16Q9H269 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
VPS16Q9H269 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.5■■□□□ 1.19
VPS16Q9H269 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
VPS16Q9H269 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS16Q9H269 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS16Q9H269 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
VPS16Q9H269 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.5■■□□□ 1.19
VPS16Q9H269 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS16Q9H269 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS16Q9H269 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS16Q9H269 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS16Q9H269 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS16Q9H269 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.5■■□□□ 1.19
VPS16Q9H269 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS16Q9H269 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
VPS16Q9H269 AC005837.3-201ENST00000612163 286 ntBASIC22.5■■□□□ 1.19
VPS16Q9H269 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
VPS16Q9H269 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS16Q9H269 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
VPS16Q9H269 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
VPS16Q9H269 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS16Q9H269 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS16Q9H269 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.49■■□□□ 1.19
VPS16Q9H269 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
VPS16Q9H269 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.49■■□□□ 1.19
VPS16Q9H269 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
VPS16Q9H269 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS16Q9H269 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.49■■□□□ 1.19
VPS16Q9H269 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
VPS16Q9H269 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS16Q9H269 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.49■■□□□ 1.19
VPS16Q9H269 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS16Q9H269 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
VPS16Q9H269 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.48■■□□□ 1.19
VPS16Q9H269 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.48■■□□□ 1.19
VPS16Q9H269 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
VPS16Q9H269 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
VPS16Q9H269 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
VPS16Q9H269 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
VPS16Q9H269 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
VPS16Q9H269 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS16Q9H269 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS16Q9H269 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS16Q9H269 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.48■■□□□ 1.19
VPS16Q9H269 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
VPS16Q9H269 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS16Q9H269 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.48■■□□□ 1.19
VPS16Q9H269 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.48■■□□□ 1.19
VPS16Q9H269 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.48■■□□□ 1.19
VPS16Q9H269 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
VPS16Q9H269 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS16Q9H269 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS16Q9H269 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.48■■□□□ 1.19
VPS16Q9H269 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.48■■□□□ 1.19
VPS16Q9H269 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.48■■□□□ 1.19
VPS16Q9H269 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS16Q9H269 KRT16P2-201ENST00000414673 1423 ntBASIC22.48■■□□□ 1.19
VPS16Q9H269 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
VPS16Q9H269 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VPS16Q9H269 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
VPS16Q9H269 AC092720.2-201ENST00000602388 1665 ntBASIC22.47■■□□□ 1.19
VPS16Q9H269 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
VPS16Q9H269 AC027612.3-201ENST00000413684 1047 ntBASIC22.47■■□□□ 1.19
VPS16Q9H269 AC245052.3-201ENST00000450182 901 ntBASIC22.47■■□□□ 1.19
VPS16Q9H269 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
VPS16Q9H269 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.47■■□□□ 1.19
VPS16Q9H269 SLC7A5P2-201ENST00000553010 536 ntBASIC22.47■■□□□ 1.19
VPS16Q9H269 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.47■■□□□ 1.19
VPS16Q9H269 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VPS16Q9H269 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
VPS16Q9H269 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VPS16Q9H269 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VPS16Q9H269 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.47■■□□□ 1.19
VPS16Q9H269 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
VPS16Q9H269 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS16Q9H269 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms