Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALX4Q9H161 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.3■□□□□ 0.36
ALX4Q9H161 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.3■□□□□ 0.36
ALX4Q9H161 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALX4Q9H161 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.3■□□□□ 0.36
ALX4Q9H161 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.29■□□□□ 0.36
ALX4Q9H161 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.29■□□□□ 0.36
ALX4Q9H161 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.29■□□□□ 0.36
ALX4Q9H161 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALX4Q9H161 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALX4Q9H161 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.29■□□□□ 0.36
ALX4Q9H161 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ALX4Q9H161 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALX4Q9H161 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ALX4Q9H161 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.29■□□□□ 0.36
ALX4Q9H161 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ALX4Q9H161 DUX4L19-201ENST00000557448 1267 ntBASIC17.29■□□□□ 0.36
ALX4Q9H161 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.29■□□□□ 0.36
ALX4Q9H161 AC106739.1-201ENST00000617035 715 ntBASIC17.29■□□□□ 0.36
ALX4Q9H161 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALX4Q9H161 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALX4Q9H161 AL158211.5-201ENST00000623583 2518 ntBASIC17.29■□□□□ 0.36
ALX4Q9H161 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
ALX4Q9H161 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ALX4Q9H161 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALX4Q9H161 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALX4Q9H161 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
ALX4Q9H161 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ALX4Q9H161 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALX4Q9H161 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALX4Q9H161 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALX4Q9H161 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ALX4Q9H161 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALX4Q9H161 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALX4Q9H161 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.28■□□□□ 0.36
ALX4Q9H161 MIR3181-201ENST00000578512 73 ntBASIC17.28■□□□□ 0.36
ALX4Q9H161 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.28■□□□□ 0.36
ALX4Q9H161 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALX4Q9H161 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALX4Q9H161 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALX4Q9H161 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ALX4Q9H161 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ALX4Q9H161 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALX4Q9H161 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALX4Q9H161 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALX4Q9H161 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALX4Q9H161 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALX4Q9H161 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
ALX4Q9H161 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ALX4Q9H161 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ALX4Q9H161 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.27■□□□□ 0.36
ALX4Q9H161 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALX4Q9H161 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
ALX4Q9H161 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALX4Q9H161 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.27■□□□□ 0.36
ALX4Q9H161 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALX4Q9H161 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ALX4Q9H161 AC125437.2-201ENST00000625180 2167 ntBASIC17.27■□□□□ 0.36
ALX4Q9H161 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALX4Q9H161 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.27■□□□□ 0.36
ALX4Q9H161 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.27■□□□□ 0.35
ALX4Q9H161 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
ALX4Q9H161 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.27■□□□□ 0.35
ALX4Q9H161 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALX4Q9H161 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ALX4Q9H161 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX4Q9H161 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.26■□□□□ 0.35
ALX4Q9H161 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALX4Q9H161 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX4Q9H161 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.26■□□□□ 0.35
ALX4Q9H161 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX4Q9H161 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.26■□□□□ 0.35
ALX4Q9H161 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
ALX4Q9H161 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.26■□□□□ 0.35
ALX4Q9H161 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALX4Q9H161 MIR4767-201ENST00000582827 78 ntBASIC17.26■□□□□ 0.35
ALX4Q9H161 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALX4Q9H161 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX4Q9H161 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX4Q9H161 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX4Q9H161 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALX4Q9H161 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX4Q9H161 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX4Q9H161 AP006587.3-201ENST00000525742 1516 ntBASIC17.26■□□□□ 0.35
ALX4Q9H161 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX4Q9H161 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALX4Q9H161 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALX4Q9H161 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALX4Q9H161 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.26■□□□□ 0.35
ALX4Q9H161 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ALX4Q9H161 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ALX4Q9H161 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALX4Q9H161 AC004408.2-201ENST00000623613 2777 ntBASIC17.25■□□□□ 0.35
ALX4Q9H161 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALX4Q9H161 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALX4Q9H161 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALX4Q9H161 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALX4Q9H161 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.25■□□□□ 0.35
ALX4Q9H161 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ALX4Q9H161 AC005837.3-201ENST00000612163 286 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms