Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.15■□□□□ 0.98
FOXP3Q9BZS1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXP3Q9BZS1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
FOXP3Q9BZS1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXP3Q9BZS1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.14■□□□□ 0.98
FOXP3Q9BZS1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.14■□□□□ 0.98
FOXP3Q9BZS1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
FOXP3Q9BZS1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
FOXP3Q9BZS1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXP3Q9BZS1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXP3Q9BZS1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
FOXP3Q9BZS1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
FOXP3Q9BZS1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
FOXP3Q9BZS1 ID1-201ENST00000376105 1233 ntBASIC21.14■□□□□ 0.97
FOXP3Q9BZS1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.14■□□□□ 0.97
FOXP3Q9BZS1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
FOXP3Q9BZS1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.14■□□□□ 0.97
FOXP3Q9BZS1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXP3Q9BZS1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
FOXP3Q9BZS1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
FOXP3Q9BZS1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXP3Q9BZS1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.13■□□□□ 0.97
FOXP3Q9BZS1 FP700111.2-201ENST00000619190 1892 ntBASIC21.13■□□□□ 0.97
FOXP3Q9BZS1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXP3Q9BZS1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
FOXP3Q9BZS1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
FOXP3Q9BZS1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FOXP3Q9BZS1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.13■□□□□ 0.97
FOXP3Q9BZS1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXP3Q9BZS1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXP3Q9BZS1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXP3Q9BZS1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.13■□□□□ 0.97
FOXP3Q9BZS1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXP3Q9BZS1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXP3Q9BZS1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
FOXP3Q9BZS1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.12■□□□□ 0.97
FOXP3Q9BZS1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
FOXP3Q9BZS1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXP3Q9BZS1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.12■□□□□ 0.97
FOXP3Q9BZS1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.12■□□□□ 0.97
FOXP3Q9BZS1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.12■□□□□ 0.97
FOXP3Q9BZS1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
FOXP3Q9BZS1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXP3Q9BZS1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXP3Q9BZS1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FOXP3Q9BZS1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FOXP3Q9BZS1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.12■□□□□ 0.97
FOXP3Q9BZS1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.12■□□□□ 0.97
FOXP3Q9BZS1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FOXP3Q9BZS1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
FOXP3Q9BZS1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FOXP3Q9BZS1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXP3Q9BZS1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXP3Q9BZS1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
FOXP3Q9BZS1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXP3Q9BZS1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.11■□□□□ 0.97
FOXP3Q9BZS1 TPRG1LP1-201ENST00000598702 760 ntBASIC21.11■□□□□ 0.97
FOXP3Q9BZS1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXP3Q9BZS1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
FOXP3Q9BZS1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXP3Q9BZS1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FOXP3Q9BZS1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FOXP3Q9BZS1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXP3Q9BZS1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.11■□□□□ 0.97
FOXP3Q9BZS1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
FOXP3Q9BZS1 AL512408.1-201ENST00000569378 2000 ntBASIC21.11■□□□□ 0.97
FOXP3Q9BZS1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 AC137761.2-201ENST00000561729 223 ntBASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 AC145350.3-201ENST00000569033 163 ntBASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
FOXP3Q9BZS1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
FOXP3Q9BZS1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXP3Q9BZS1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
FOXP3Q9BZS1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXP3Q9BZS1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXP3Q9BZS1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.09■□□□□ 0.97
FOXP3Q9BZS1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
FOXP3Q9BZS1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXP3Q9BZS1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms