Protein–RNA interactions for Protein: Q9BYQ3

KRTAP9-3, Keratin-associated protein 9-3, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-3Q9BYQ3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP9-3Q9BYQ3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC9.43□□□□□ -0.9
KRTAP9-3Q9BYQ3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC9.43□□□□□ -0.9
KRTAP9-3Q9BYQ3 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC9.43□□□□□ -0.9
KRTAP9-3Q9BYQ3 AC006557.6-201ENST00000623071 864 ntBASIC9.43□□□□□ -0.9
KRTAP9-3Q9BYQ3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP9-3Q9BYQ3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP9-3Q9BYQ3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP9-3Q9BYQ3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 SAPCD2P4-201ENST00000424595 1171 ntBASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 AL117351.1-201ENST00000438864 766 ntBASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 AC008267.7-201ENST00000624570 1194 ntBASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 AC010542.4-201ENST00000563151 1910 ntBASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP9-3Q9BYQ3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 AP003071.4-201ENST00000562276 1284 ntBASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 AC026471.5-201ENST00000615068 467 ntBASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 AC008147.4-201ENST00000617570 1204 ntBASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 AC116050.2-201ENST00000612102 1779 ntBASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP9-3Q9BYQ3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP9-3Q9BYQ3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP9-3Q9BYQ3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP9-3Q9BYQ3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms