Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAF4Q9BUZ4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAF4Q9BUZ4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRAF4Q9BUZ4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TRAF4Q9BUZ4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAF4Q9BUZ4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAF4Q9BUZ4 AL034346.1-201ENST00000568244 1277 ntBASIC18.28■□□□□ 0.52
TRAF4Q9BUZ4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAF4Q9BUZ4 AC231657.2-201ENST00000624556 255 ntBASIC18.28■□□□□ 0.52
TRAF4Q9BUZ4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
TRAF4Q9BUZ4 MYCNOS-205ENST00000641950 531 ntBASIC18.28■□□□□ 0.52
TRAF4Q9BUZ4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAF4Q9BUZ4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
TRAF4Q9BUZ4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAF4Q9BUZ4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF4Q9BUZ4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF4Q9BUZ4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAF4Q9BUZ4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF4Q9BUZ4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAF4Q9BUZ4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF4Q9BUZ4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRAF4Q9BUZ4 GPX1P1-201ENST00000388829 606 ntBASIC18.27■□□□□ 0.52
TRAF4Q9BUZ4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF4Q9BUZ4 AL355802.2-201ENST00000402069 882 ntBASIC18.27■□□□□ 0.52
TRAF4Q9BUZ4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF4Q9BUZ4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAF4Q9BUZ4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF4Q9BUZ4 DUX4L16-201ENST00000555130 1264 ntBASIC18.27■□□□□ 0.52
TRAF4Q9BUZ4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF4Q9BUZ4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRAF4Q9BUZ4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.27■□□□□ 0.52
TRAF4Q9BUZ4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAF4Q9BUZ4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAF4Q9BUZ4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAF4Q9BUZ4 AC087289.5-201ENST00000586076 3175 ntBASIC18.27■□□□□ 0.51
TRAF4Q9BUZ4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRAF4Q9BUZ4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAF4Q9BUZ4 SMG8-203ENST00000578922 2178 ntBASIC18.25■□□□□ 0.51
TRAF4Q9BUZ4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF4Q9BUZ4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF4Q9BUZ4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF4Q9BUZ4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF4Q9BUZ4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF4Q9BUZ4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.25■□□□□ 0.51
TRAF4Q9BUZ4 AC007322.1-201ENST00000426983 750 ntBASIC18.25■□□□□ 0.51
TRAF4Q9BUZ4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAF4Q9BUZ4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.25■□□□□ 0.51
TRAF4Q9BUZ4 AC138907.5-202ENST00000569484 235 ntBASIC18.25■□□□□ 0.51
TRAF4Q9BUZ4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAF4Q9BUZ4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAF4Q9BUZ4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRAF4Q9BUZ4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.25■□□□□ 0.51
TRAF4Q9BUZ4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF4Q9BUZ4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF4Q9BUZ4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRAF4Q9BUZ4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF4Q9BUZ4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF4Q9BUZ4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF4Q9BUZ4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF4Q9BUZ4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAF4Q9BUZ4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF4Q9BUZ4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF4Q9BUZ4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
TRAF4Q9BUZ4 AC010141.2-201ENST00000452426 721 ntBASIC18.24■□□□□ 0.51
TRAF4Q9BUZ4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF4Q9BUZ4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF4Q9BUZ4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAF4Q9BUZ4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.24■□□□□ 0.51
TRAF4Q9BUZ4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRAF4Q9BUZ4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAF4Q9BUZ4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAF4Q9BUZ4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF4Q9BUZ4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF4Q9BUZ4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAF4Q9BUZ4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF4Q9BUZ4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms