Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NDC1Q9BTX1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.58■□□□□ 0.73
NDC1Q9BTX1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NDC1Q9BTX1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NDC1Q9BTX1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
NDC1Q9BTX1 Z98882.1-201ENST00000622160 2253 ntBASIC19.58■□□□□ 0.73
NDC1Q9BTX1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NDC1Q9BTX1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.58■□□□□ 0.73
NDC1Q9BTX1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NDC1Q9BTX1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NDC1Q9BTX1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NDC1Q9BTX1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NDC1Q9BTX1 AL355472.2-201ENST00000422958 438 ntBASIC19.58■□□□□ 0.72
NDC1Q9BTX1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.58■□□□□ 0.72
NDC1Q9BTX1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.58■□□□□ 0.72
NDC1Q9BTX1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
NDC1Q9BTX1 CYP2T3P-201ENST00000601990 817 ntBASIC19.58■□□□□ 0.72
NDC1Q9BTX1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NDC1Q9BTX1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NDC1Q9BTX1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NDC1Q9BTX1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NDC1Q9BTX1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 AL589743.5-201ENST00000616611 1050 ntBASIC19.57■□□□□ 0.72
NDC1Q9BTX1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NDC1Q9BTX1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.56■□□□□ 0.72
NDC1Q9BTX1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NDC1Q9BTX1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDC1Q9BTX1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.56■□□□□ 0.72
NDC1Q9BTX1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDC1Q9BTX1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDC1Q9BTX1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDC1Q9BTX1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDC1Q9BTX1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDC1Q9BTX1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
NDC1Q9BTX1 DUSP5P2-201ENST00000426873 1033 ntBASIC19.56■□□□□ 0.72
NDC1Q9BTX1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NDC1Q9BTX1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.56■□□□□ 0.72
NDC1Q9BTX1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.56■□□□□ 0.72
NDC1Q9BTX1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.56■□□□□ 0.72
NDC1Q9BTX1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.56■□□□□ 0.72
NDC1Q9BTX1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDC1Q9BTX1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDC1Q9BTX1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.56■□□□□ 0.72
NDC1Q9BTX1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDC1Q9BTX1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.56■□□□□ 0.72
NDC1Q9BTX1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.55■□□□□ 0.72
NDC1Q9BTX1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.55■□□□□ 0.72
NDC1Q9BTX1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NDC1Q9BTX1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NDC1Q9BTX1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NDC1Q9BTX1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.55■□□□□ 0.72
NDC1Q9BTX1 KRT18P68-201ENST00000392293 1000 ntBASIC19.55■□□□□ 0.72
NDC1Q9BTX1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NDC1Q9BTX1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
NDC1Q9BTX1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NDC1Q9BTX1 AC091874.3-201ENST00000512672 1195 ntBASIC19.55■□□□□ 0.72
NDC1Q9BTX1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.55■□□□□ 0.72
NDC1Q9BTX1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.55■□□□□ 0.72
NDC1Q9BTX1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.55■□□□□ 0.72
NDC1Q9BTX1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.55■□□□□ 0.72
NDC1Q9BTX1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
NDC1Q9BTX1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NDC1Q9BTX1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.55■□□□□ 0.72
NDC1Q9BTX1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
NDC1Q9BTX1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NDC1Q9BTX1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NDC1Q9BTX1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
NDC1Q9BTX1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NDC1Q9BTX1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NDC1Q9BTX1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.54■□□□□ 0.72
NDC1Q9BTX1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.54■□□□□ 0.72
NDC1Q9BTX1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NDC1Q9BTX1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NDC1Q9BTX1 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.54■□□□□ 0.72
NDC1Q9BTX1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.54■□□□□ 0.72
NDC1Q9BTX1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NDC1Q9BTX1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.54■□□□□ 0.72
NDC1Q9BTX1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NDC1Q9BTX1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms